Publications 2016

Lavergne A. et al.
Identification of lymphocytic choriomeningitis mammarenavirus in house mouse (Mus musculus, Rodentia) in French Guiana
Infect Genet Evol. (2016) 37:225-30
doi: 10.1016/j.meegid.2015.11.023

Roquis D. et al.
Frequency and mitotic heritability of epimutations in Schistosoma mansoni
Mol Ecol. (2016) 25:1741-58
doi: 10.1111/mec.13555

Gargaun E. et al.
EGR2 mutation enhances phenotype spectrum of Dejerine-Sottas syndrome
J Neurol. (2016) 263(7):1456-8
doi: 10.1007/s00415-016-8153-9

Remenant B. et al.
Draft Genome Sequence of Carnobacterium divergens V41, a Bacteriocin-Producing Strain
Genome Announc. (2016) 4(5)
doi: 10.1128/genomeA.01109-16

Arguel MJ. et al.
A cost effective 5' selective single cell transcriptome profiling approach with improved UMI design
Nucleic Acids Res. (2016) Dec 9. pii: gkw1242

Landel V. et al.
Vitamin D interacts with Esr1 and Igf1 to regulate molecular pathways relevant to Alzheimer's disease
Molecular Neurodegeneration. (2016)
doi: 10.1186/s13024-016-0087-2

Guarani V. et al.
QIL1 mutation causes MICOS disassembly and early onset fatal mitochondrial encephalopathy with liver disease
Elife. (2016) 5. pii: e17163
doi: 10.7554

Forster, D. et al.
Benthic protists: the under-charted majority
Fems Microbiology Ecology. (2016) 92(8)

Vannier, T. et al.
Survey of the green picoalga Bathycoccus genomes in the global ocean
Scientific Reports. (2016) 6: p. e37900

Bisch G. et al.
Comparative Genomics between Two Xenorhabdus bovienii Strains Highlights Differential Evolutionary Scenarios within an Entomopathogenic Bacterial Species
Genome Biol Evol. (2016) 8(1):148-60
doi: 10.1093/gbe/evv248

Beghain J. et al.
Plasmodium copy number variation scan: gene copy numbers evaluation in haploid genomes
Malar J. (2016) 15:206
doi: 10.1186/s12936-016-1258-x

Mazuet C. et al.
A penicillin- and metronidazole-resistant Clostridium botulinum strain responsible for an infant botulism case
Clin Microbiol Infect. (2016) (7):644.e7-644.e12
doi: 10.1016/j.cmi.2016.04.011

Njamkepo E. et al.
Erratum: Global phylogeography and evolutionary history of Shigella dysenteriae type 1
Nat Microbiol. (2016) 1(11):16209
doi: 10.1038/nmicrobiol.2016.209

Zangari J. et al.
Rapid decay of engulfed extracellular miRNA by XRN1 exonuclease promotes transient epithelial-mesenchymal transition
Nucleic Acids Res. (2016) Dec 19. pii: gkw1284

Zedane L. et al.
Museomics illuminate the history of an extinct, paleoendemic plant lineage (Hesperelaea, Oleaceae) known from an 1875 collection from Guadalupe Island, Mexico
Biological Journal of the Linnean Society
doi: (2016) 117, 44-57

Renaud M. et al.
Expanding the spectrum of PEX10-related peroxisomal biogenesis disorders: slowly progressive recessive ataxia
J Neurol. (2016) 263(8):1552-8
doi: 10.1007/s00415-016-8167-3

Kole, C. et al.
Identification of an Alternative Splicing Product of the Otx2 Gene Expressed in the Neural Retina and Retinal Pigmented Epithelial Cells
PLoS One. (2016) 11(3): p. e0150758

Weissenbach J.
The rise of genomics
Comptes Rendus Biologies. (2016) 339(7-8): p. 231-239

St John EP. et al.
454 HIV-1 Alpha Study Group. A Follow-Up of the Multicenter Collaborative Study on HIV-1 Drug Resistance and TropismTesting sing 454 Ultra Deep Pyrosequencing
PLoS One. (2016) 11(1):e0146687
doi: 10.1371/journal.pone.0146687

Plucain J. et al.
Contrasting effects of historical contingency on phenotypic and genomic trajectories during a two-step evolution experiment with bacteria
BMC Evol Biol. (2016) 16:86
doi: 10.1186/s12862-016-0662-8

Accarias S. et al.
Single-cell analysis reveals new subset markers of murine peritoneal macrophages and highlights macrophage dynamics upon Staphylococcus aureus peritonitis
Innate Immun. (2016) (5):382-92
doi: 10.1177/ 1753425916651330

Belda E. et al.
The revisited genome of Pseudomonas putida KT2440 enlightens its value as a robust metabolic chassis
Environ Microbiol. (2016) 18(10):3403-3424
doi: 10.1111/1462-2920.13230

Alzaid F. et al.
IRF5 governs liver macrophage activation that promotes hepatic fibrosis in mice and humans
JCI Insight. (2016) Dec 8. 1(20):e88689

Koechler S. et al.
Arsenite response in Coccomyxa sp. Carn explored by transcriptomic and non-targeted metabolomic approaches
Environmental Microbiology. (2016) pr.18(4):1289-300
doi: 10.1111/1462-2920.13227

Haas G. et al.
Identification of factors involved in target RNA-directed microRNA degradation
Nucleic Acids Res. (2016) 44(6):2873-87
doi: 10.1093/nar/gkw040

Le Bescot, N. et al.
Global patterns of pelagic dinoflagellate diversity across protist size classes unveiled by metabarcoding
Environmental Microbiology. (2016) 18(2): p. 609-626

Weissenbach, J. et al.
Microbiotes and metagenomics
M S-Medecine Sciences. (2016) 32(11): p. 937-943

Merlevede J. et al.
Mutation allele burden remains unchanged in chronic myelomonocytic leukaemia responding to hypomethylating agents
Nat Commun. (2016) 7: 10767
doi: 10.1038/ncomms10767

Guidi, L. et al.
Plankton networks driving carbon export in the oligotrophic ocean
Nature. (2016) 532(7600): p. 465-470
doi: 10.1038/nature16942

Moutel S. et al.
NaLi-H1: A universal synthetic library of humanized nanobodies providing highly functional antibodies and intrabodies
Elife. (2016) Jul 19.5. pii: e16228
doi: 10.7554/eLife.16228