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  2. Technological watch

Expertise

Technological watch

FRANCE GENOMIQUE’s platforms, with the support of the governance, also ensure a technological watch to upgrade protocols or develop new ones in order to remain at the cutting-edge of sequencing technologies.

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  • Technological expertises
    • The catalog of expertise
    • Whole Genome
      • « Short read » sequencing through « clustering »
      • « Short read » sequencing by DNB
      • « Mate Pair » Sequencing
      • « Long Read » Sequencing
      • « Long Reads ONT » Sequencing
      • « Synthetic Long Read » Sequencing
      • Optical Mapping
      • Tn-Seq
      • Omni-C
      • Pore-C
    • Targeted genome
      • AmpliSeq (targeted regions, exome, SSRs)
      • RAD seq
      • Adaptive sampling
    • Transcriptome
      • Ribo-Seq
    • Spatial transcriptomics
      • Transcriptome-wide or NGS-based approaches
      • Targeted spatial omics methods using RNA probes
  • Technological expertises (continue)
    • Regulome
      • Small RNA Sequencing
      • TSS seq
      • ATAC seq
      • FAIRE seq
      • MNase seq
      • DNase seq
      • 3C, 4C and 5C-seq
      • HiC-seq
      • CHIP seq
      • CLIP seq
      • CUT & RUN vs CUT & Tag
      • MeDIP
      • BiSeq
      • Methyl seq
      • EM-seq
      • TAPS/TAPSβ
      • Methylation of native DNA and RNA
    • Metagenomics
      • Metagenomics using targeted amplicon/ barcoding/metabarcoding
      • Shotgun metagenomics
    • Single Cell
      • scDNA-seq
      • scRNAseq
      • ScNaUmi-seq
    • Genotyping (DNA, RNA, CpG arrays)
  • Bioinformatics tools
    • Data managment and processing
      • EOULSAN
      • AOZAN
      • ToulligQC
    • Data analysis
      • seqMINER
      • BioConvert
  • Databases
    • FREX : THE FRENCH EXOME PROJECT DATABASE
    • OGA V2.0 : Ocean Gene Atlas v2.0
  • Technological watch
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