Publications 2017
Terrat S. et al.
Correction: Mapping and predictive variations of soil bacterial richness across France.
PLoS One (2017) Dec. 12(12):e0190128.
doi: 10.1371/journal.pone.0190128
Letouze E. et al.
Mutational signatures reveal the dynamic interplay of risk factors and cellular processes during liver tumorigenesis.
Nat Commun. (2017) Nov. 8(1):1315.
doi: 10.1038/s41467-017-01358-x
Milet C. et al.
Egr1 deficiency induces browning of inguinal subcutaneous white adipose tissue in mice.
Sci. Rep. (2017) Nov. 7(1):16153.
doi: 10.1038/s41598-017-16543-7
Gervais J. et al.
Different waves of effector genes with contrasted genomic location are expressed by Leptosphaeria maculans during cotyledon and stem colonization of oilseed rape.
Mol Plant Pathol. (2017) Oct. 18(8):1113-1126.
doi: 10.1111/mpp.12464
Martin G. et al.
Evolution of the Banana genome (Musa acuminata) is Impacted by large chromosomal translocations.
Mol Biol Evol. (2017) Sep. 34(9):2140-2152.
doi: 10.1093/molbev/msx164
Galia W. et al.
Strand-specific transcriptomes of Enterohemorrhagic Escherichia coli in response to interactions with ground beef microbiota: interactions between microorganisms in raw meat.
BMC Genomics (2017) Aug. 18(1):574.
doi: 10.1186/s12864-017-3957-2
Blanc-Mathieu R. et al.
Population genomics of picophytoplankton unveils novel chromosome hypervariability.
Sci Adv. (2017) Jul. 3(7): e1700239.
doi: 10.1126/sciadv.1700239
Engel M. et al.
Influence of lung CT changes in chronic obstructive pulmonary disease (COPD) on the human lung microbiome.
PLoS One (2017) Jul. 12(7):e0180859.
doi: 10.1371/journal.pone.0180859
Pincez T. et al.
Feasibility and clinical integration of molecular profiling for target identification in pediatric solid tumors.
Pediatr Blood Cancer (2017) Jun. 64(6).
doi: 10.1002/pbc.26365
Contrepois K. et al.
Histone variant H2A.J accumulates in senescent cells and promotes inflammatory gene expression.
Nat Commun. (2017) May. 8:14995.
doi: 10.1038/ncomms14995
Marchetti M. et al.
Experimental evolution of rhizobia may lead to either extra- or intracellular symbiotic adaptation depending on the selection regime.
Mol. Ecol. (2017) Apr. 26(7):1818-1831.
doi: 10.1111/mec.13895
Leroy T. et al.
Extensive recent secondary contacts between four European white oak species.
New Phytol. (2017) Apr. 214(2):865-878.
doi: 10.1111/nph.14413
Boulay AC. et al.
Translation in astrocyte distal processes sets molecular heterogeneity at the gliovascular interface.
Cell Discov. (2017) Mar. 3:17005.
doi: 10.1038/celldisc.2017.5
Cabau C. et al.
Compacting and correcting Trinity and Oases RNA-Seq de novo assemblies.
PeerJ. (2017) Feb. 5: e2988.
doi: 10.7717/peerj.2988
Witkowski B. et al.
A surrogate marker of piperaquine-resistant Plasmodium falciparum malaria: a phenotype-genotype association study.
Lancet Infect Dis. (2017) Feb. 17(2):174-183.
doi: 10.1016/S1473-3099(16)30415-7
Monat C. et al.
De novo assemblies of three Oryza glaberrima accessions provide first insights about pan-genome of african rices.
Genome Biol Evol. (2017) Jan 1. 9(1):1-6.
doi: 10.1093/gbe/evw253
Pham N-P. et al.
Comparative genomic analysis of Brevibacterium strains: insights into key genetic determinants involved in adaptation to the cheese habitat.
BMC Genomics (2017) Dec. 18(1):955.
doi: 10.1186/s12864-017-4322-1
Machiela MJ. et al.
Genetic variants related to longer telomere length are associated with increased risk of Renal Cell Carcinoma.
Europ. Urol. (2017) Nov. 72 (5): 747-754
doi: 10.1016/j.eururo.2017.07.015
Medina C. et al.
Characterization of microRNAs from Arabidopsis galls highlights a role for miR159 in the plant response to the root-knot nematode Meloidogyne incognita.
New Phytol. (2017) Nov. 216(3):882-896.
doi: 10.1111/nph.14717
Lanaud C. et al.
Deciphering the Theobroma cacao self-incompatibility system: from genomics to diagnostic markers for self-compatibility.
J Exp Bot. (2017) Oct. 68(17):4775-4790.
doi: 10.1093/jxb/erx293
Ivanova ELet al.
Homozygous truncating variants in TBC1D23 cause Pontocerebellar Hypoplasia and alter cortical development.
Am J Hum Genet. (2017) Sep. 101(3):428-440.
doi: 10.1016/j.ajhg.2017.07.010
Dickson LB. et al.
Carryover effects of larval exposure to different environmental bacteria drive adult trait variation in a mosquito vector.
Sci Adv (2017) Aug. 3(8):e1700585.
doi: 10.1126/sciadv.1700585.
Bellenguez C. et al.
Contribution to Alzheimer's disease risk of rare variants in TREM2, SORL1, and ABCA7 in 1779 cases and 1273 controls.
Neurobiol. Aging (2017) Jul. pii: S0197-4580(17)30232-4.
doi: 10.1016/j.neurobiolaging.2017.07.001
Nicolas G. et al.
Brain calcifications and PCDH12 variants.
Neurol Genet. (2017) Jul. 3(4):e166.
doi: 10.1212/NXG.0000000000000166
Penaud-Budloo M. et al.
Accurate identification and quantification of DNA species by Next-Generation Sequencing in adeno-associated viral vectors produced in Insect cells.
Hum Gene Ther Methods (2017) Jun. 28(3):148-162.
doi: 10.1089/hgtb.2016.185
Hautefort A. et al.
Pulmonary endothelial cell DNA methylation signature in pulmonary arterial hypertension.
Oncotarget (2017) May. 8(32):52995-53016.
doi: 10.18632/oncotarget.18031
Deutsch S-M. et al.
Deutsch S-M. et al. Identification of proteins involved in the anti-inflammatory properties of Propionibacterium freudenreichii by means of a multi-strain study.
Sci. Rep. (2017) Apr. 7:46409.
doi: 10.1038/srep46409
Thomas C. et al.
Erratum to: Rapid transcriptional plasticity of duplicated gene clusters enables a clonally reproducing aphid to colonise diverse plant species.
Genome Biology (2017) Apr. 18 (1): 63.
doi: doi :10.1186/s13059-017-1202-6
Mercey O. et al.
Characterizing isomiR variants within the microRNA-34/449 family.
FEBS Lett. (2017) Mar. 591(5):693-705.
doi: 10.1002/1873-3468.12595
Arandel L. et al.
Immortalized human myotonic dystrophy muscle cell lines to assess therapeutic compounds.
Disease Models Mechanisms (2017) Feb. 10: 487-497.
doi: 10.1242/dmm.027367