Publications 2018

Meng A et al.
Analysis of the genomic basis of functional diversity in dinoflagellates using a transcriptome-based sequence similarity network
Molecular Ecology 2018 27(10)
doi: 10.1111/mec.14579

Maurin aT et al.
HITS-CLIP in various brain areas reveals new targets and new modalities of RNA binding by fragile X mental retardation protein
Nucleic Acids Research 2018 46(12)
doi: 10.1093/nar/gky267

Costa A et al.
Fibroblast Heterogeneity and Immunosuppressive Environment in Human Breast Cancer
Cancer Cell 2018 33(3)
doi: 10.1016/j.ccell.2018.01.011

Pace L et al.
The epigenetic control of stemness in CD8$mathplus$ T cell fate commitment
Science 2018 359(6372)
doi: 10.1126/science.aah6499

Baudrin LG et al.
Molecular and Computational Methods for the Detection of Microsatellite Instability in Cancer
Frontiers in Oncology 2018 8
doi: 10.3389/fonc.2018.00621

Daviaud C et al.
Whole-Genome Bisulfite Sequencing Using the Ovation® Ultralow Methyl-Seq Protocol
Springer New York 2017
doi: 10.1007/978-1-4939-7481-8_5

Lønning PE et al.
White Blood Cell BRCA1 Promoter Methylation Status and Ovarian Cancer Risk
Annals of Internal Medicine 2018 168(5)
doi: 10.7326/M17-0101

Ulff-Møller CJ et al.
Twin DNA Methylation Profiling Reveals Flare-Dependent Interferon Signature and B Cell Promoter Hypermethylation in Systemic Lupus Erythematosus
Arthritis & Rheumatology 2018 70(6)
doi: 10.1002/art.40422

Chatterjee S et al.
Reinstating plasticity and memory in a tauopathy mouse model with an acetyltransferase activator
EMBO Molecular Medicine 2018 10(11)
doi: 10.15252/emmm.201708587

Lanza VF et al.
In-depth resistome analysis by targeted metagenomics
Microbiome 2018 6(1)
doi: 10.1186/s40168-017-0387-y

Sadoul B et al.
Enhanced brain expression of genes related to cell proliferation and neural differentiation is associated with cortisol receptor expression in fishes
General and Comparative Endocrinology 2018 267
doi: 10.1016/j.ygcen.2018.06.001

Gautier M et al.
The Genomic Basis of Color Pattern Polymorphism in the Harlequin Ladybird
Current Biology 2018 28(20)
doi: 10.1016/j.cub.2018.08.023

Liu W et al.
Assessment of Bona Fide sRNAs in Staphylococcus aureus
Frontiers in Microbiology 2018 9
doi: 10.3389/fmicb.2018.00228

Rainer Borriss R et al.
Bacillus subtilis,
the model Gram-positive bacterium: 20 years of annotation refinement
Microbial Biotechnology 2017 11(1)
doi: 10.1111/1751-7915.13043

Viricel C et al.
Cost function network-based design of protein–protein interactions: predicting changes in binding affinity
Bioinformatics 2018 34(15)
doi: 10.1093/bioinformatics/bty092

Derelle E et al.
Prasinovirus Attack ofOstreococcusIs Furtive by Day but Savage by Night
Journal of Virology 2017
doi: 10.1128/JVI.01703-17

Gschloessl B et al.
Draft genome and reference transcriptomic resources for the urticating pine defoliator Thaumetopoea pityocampa(Lepidoptera: Notodontidae
Mol Ecol Resour.2018 18:602–619
doi: 10.1111/1755-0998.12756

Robles M et al.
Placental function and structure at term is altered in broodmares fed with cereals from mid-gestation
Placenta 2018 64
doi: 10.1016/j.placenta.2018.02.003

Cubry P et al.
The Rise and Fall of African Rice Cultivation Revealed by Analysis of 246 New Genomes
Current Biology 2018 28(14)
doi: 10.1016/j.cub.2018.05.066

Meng A et al.
A de novo approach to disentangle partner identity and function in holobiont systems
Microbiome 2018 6(1)
doi: 10.1186/s40168-018-0481-9

Giovannini-Chami L et al.
The “one airway, one disease” concept in light of Th2 inflammation
European Respiratory Journal 2018 52(4)
doi: 10.1183/13993003.00437-2018

Courel M et al.
GC content shapes mRNA decay and storage in human cells
Cold Spring Harbor Laboratory 2018
doi: 10.1101/373498

Renault AL et al.
Morphology and genomic hallmarks of breast tumours developed by ATM deleterious variant carriers
Breast Cancer Research 2018 20(1)
doi: 10.1186/s13058-018-0951-9

Baudrin LG et al.
Improved Microsatellite Instability Detection and Identification by Nuclease-Assisted Microsatellite Instability Enrichment Using HSP110 T17
Clinical Chemistry 2018 64(8)
doi: 10.1373/clinchem.2018.287490

de Haan HG et al.
Genome-Wide Association Study Identifies a Novel Genetic Risk Factor for Recurrent Venous Thrombosis
Circulation: Genomic and Precision Medicine 2018 11(2
doi: 10.1161/circgen.117.001827

Lornage X et al.
Novel SPEG Mutations in Congenital Myopathy without Centralized Nuclei
Journal of Neuromuscular Diseases 2018 5(2)
doi: 10.3233/JND-170265

Velasco G et al.
Comparative methylome analysis of ICF patients identifies heterochromatin loci that require ZBTB24, CDCA7 and HELLS for their methylated state
Human Molecular Genetics 2018 27(14)
doi: 10.1093/hmg/ddy130

Henriques A et al.
Sphingolipid Metabolism Is Dysregulated at Transcriptomic and Metabolic Levels in the Spinal Cord of an Animal Model of Amyotrophic Lateral Sclerosis
Frontiers in Molecular Neuroscience 2018 10
doi: 10.3389/fnmol.2017.00433

Dehecq M et al.
Nonsense-mediated mRNA decay involves two distinct Upf1-bound complexes
The EMBO Journal 2018 37(21)
doi: 10.15252/embj.201899278

Philippe C et al.
AICAR Antiproliferative Properties Involve the AMPK-Independent Activation of the Tumor Suppressors LATS 1 and 2
Neoplasia 2018 20(6)
doi: 10.1016/j.neo.2018.03.006