Publications 2018

Plainvert C et al.
A clone of the emergent Streptococcus pyogenes emm89 clade responsible for a large outbreak in a post-surgery oncology unit in France
Medical Microbiology and Immunology 2018 207(5-6)
doi: 10.1007/s00430-018-0546-1

Raymond O et al.

The Rosa genome provides new insights into the domestication of modern roses.

Nat Genet. 2018 50(6)

 doi: 10.1038/s41588-018-0110-3.


Alberto FL et al.
Convergent genomic signatures of domestication in sheep and goats
Nat Commun. 2018 9(1)
doi: 10.1038/s41467-018-03206-y

Kazamia E et al.
Endocytosis-mediated siderophore uptake as a strategy for Fe acquisition in diatoms
Science Advances 2018 4(5)
doi: 10.1126/sciadv.aar4536

Marchet C et al.
De novo clustering of long reads by gene from transcriptomics data
Nucleic Acids Research 2018 47(1)
doi: 10.1093/nar/gky834

Cacheux W et al.
Array comparative genomic hybridization identifies high level of PI3K/Akt/mTOR pathway alterations in anal cancer recurrences
Cancer Medicine 2018 7(7)
doi: 10.1002/cam4.1533

Lopez-Delisle L et al.
Activated ALK signals through the ERK–ETV5–RET pathway to drive neuroblastoma oncogenesis
Oncogene 2018 37(11)
doi: 10.1038/s41388-017-0039-5

Gitte B et al.
A Summary of the Biological Processes, Disease-Associated Changes and Clinical Applications of DNA Methylation
Springer New York 2017
doi: 10.1007/978-1-4939-7481-8_1

Ceyzériat K et al.
Modulation of astrocyte reactivity improves functional deficits in mouse models of Alzheimer's disease
Acta Neuropathologica Communications 2018 6(1)
doi: 10.1186/s40478-018-0606-1

Jonson PH et al.
Novel mutations in DNAJB6 cause LGMD1D and distal myopathy in French families
European Journal of Neurology 2018 25(5)
doi: 10.1111/ene.13598

Stengel B et al.
Risk profile, quality of life and care of patients with moderate and advanced CKD: The French CKD-REIN Cohort Study
Nephrology Dialysis Transplantation 2018 34(2)
doi: 10.1093/ndt/gfy058

Grüning B et al.
Bioconda: sustainable and comprehensive software distribution for the life sciences
Nature Methods 2018 15(7)
doi: 10.1038/s41592-018-0046-7

Plainvert C et al.
A clone of the emergent Streptococcus pyogenes emm89 clade responsible for a large outbreak in a post-surgery oncology unit in France
Medical Microbiology and Immunology 2018 207(5-6)
doi: 10.1007/s00430-018-0546-1

Orsucci M et al.
Transcriptomic response of female adult moths to host and non-host plants in two closely related species
BMC Evolutionary Biology 2018 18(1)
doi: 10.1186/s12862-018-1257-3

Lomet D et al.
The impact of thyroid hormone in seasonal breeding has a restricted transcriptional signature
Cellular and Molecular Life Sciences 2017 75(5)
doi: 10.1007/s00018-017-2667-x

Rochat T et al.
The conserved regulatory RNA RsaE down-regulates the arginine degradation pathway in Staphylococcus aureus
Nucleic Acids Research 2018 46(17)
doi: 10.1093/nar/gky584

Duchemin W et al.
RecPhyloXML: a format for reconciled gene trees
Bioinformatics 2018 34(21)
doi: 10.1093/bioinformatics/bty389

Ohlmann M et al.
Mapping the imprint of biotic interactions on $p?beta$-diversity
Ecology Letters 2018 21(11)
doi: 10.1111/ele.13143

Bruxaux J et al.
Recovering the evolutionary history of crowned pigeons (Columbidae: Goura) : Implications for the biogeography and conservation of New Guinean lowland birds
Molecular Phylogenetics and Evolution 2018 120
doi: 10.1016/j.ympev.2017.11.022

Andersson L et al.
Coordinated international action to accelerate genome-to-phenome with FAANG, the Functional Annotation of Animal Genomes project
Genome Biology 2015 16(1)
doi: 10.1186/s13059-015-0622-4

Plomion C et al.
Oak genome reveals facets of long lifespan
Nature Plants 2018 4(7)
doi: 10.1038/s41477-018-0172-3

Appels R et al.
Shifting the limits in wheat research and breeding using a fully annotated reference genome
Science 2018 361(6403)
doi: 10.1126/science.aar7191

Leblanc K et al.
Nanoplanktonic diatoms are globally overlooked but play a role in spring blooms and carbon export
Nature Communications 2018 9(1)
doi: 10.1038/s41467-018-03376-9

Peter J et al.
Genome evolution across 1,011 Saccharomyces cerevisiae isolates
Nature 2018 556(7701)
doi: 10.1038/s41586-018-0030-5

Campagne A et al.
The BAP1 deubiquitinase complex is a general transcriptional co-activator
Cold Spring Harbor Laboratory 2018
doi: 10.1101/244152

Machiela MJ et al.
Genome-wide association study identifies multiple new loci associated with Ewing sarcoma susceptibility
Nat Commun. 2018 9(1)
doi: 10.1038/s41467-018-05537-2

Anttila V et al.
Analysis of shared heritability in common disorders of the brain
Science 2018 360(6395)
doi: 10.1126/science.aap8757

Coutton C et al.
Mutations in CFAP43 and CFAP44 cause male infertility and flagellum defects in Trypanosoma and human
Nature Communications 2018 9(1)
doi: 10.1038/s41467-017-02792-7

Kernaleguen M et al.
Whole-Genome Bisulfite Sequencing for the~Analysis of Genome-Wide DNA Methylation and Hydroxymethylation Patterns at Single-Nucleotide Resolution
Springer New York 2018
doi: 10.1007/978-1-4939-7774-1_18

Stoeklé HC et al.
Artificial intelligence in internal medicine: Between science and pseudoscience
European Journal of Internal Medicine 2018 51
doi: 10.1016/j.ejim.2018.01.027