Publications 2016
Jackson, R. et al.
Functional variants of human papillomavirus type 16 demonstrate host genome integration and transcriptional alterations corresponding to their unique cancer epidemiology
BMC Genomics. (2016) Nov 2.17(1):851. Erratum in: BMC Genomics. 2016 Dec 12.17 (1):1018
doi:
Glaser P. et al.
Demography and Intercontinental Spread of the USA300 Community-Acquired Methicillin-Resistant Staphylococcus aureus Lineage
MBio. (2016) 7(1):e02183-15
doi: 10.1128/mBio.02183-15
Merhej J. et al.
A Network of Paralogous Stress Response Transcription Factors in the Human Pathogen Candida glabrata
Front Microbiol. (2016) 7:645
doi: 10.3389/fmicb.2016.00645
Boritsch EC. et al.
Key experimental evidence of chromosomal DNA transfer among selected tuberculosis-causing mycobacteria
Proc Natl Acad Sci U S A. (2016) 113(35):9876-81
doi: 10.1073/pnas.1604921113
Hugonnet JE. et al.
Factors essential for L,D-transpeptidase-mediated peptidoglycan cross-linking and β-lactam resistance in Escherichia coli
Elife. (2016) pii: e19469
doi: 10.7554/eLife.19469
Lelandais G. et al.
ChIPseq in Yeast Species: From Chromatin Immunoprecipitation to High-Throughput Sequencing and Bioinformatics Data Analyses
Methods Mol Biol. (2016) 1361:185-202
doi: 10.1007/978-1-4939-3079-1_11
Helwi P. et al.
Vine nitrogen status and volatile thiols and their precursors from plot to transcriptome level
BMC Plant Biol . (2016) 16: 173
doi: 10.1186/s12870-016-0836-y
Gallouet AS. et al.
Macrophage production and activation are dependent on TRIM33
Oncotarget. (2016) 8(3):5111-5122
doi: 10.18632/oncotarget.13872
Boutet G. et al.
SNP discovery and genetic mapping using genotyping by sequencing of whole genome genomic DNA from a pea RIL population
BMC Genomics. (2016) 17:121
doi: 10.1186/s12864-016-2447-2
Bussard A. et al.
Physiological adjustments and transcriptome reprogramming are involved in the acclimation to salinity gradients in diatoms
Environ Microbiol. (2016)
doi: 10.1111/1462-2920.13398
Khalfallah O. et al.
Depletion of the fragile X mental retardation protein in embryonic stem cells alters the kinetics of neurogenesis
Stem Cells. (2016)
doi: 10.1002/stem.2505
Nibourel O. et al.
Copy-number analysis identified new prognostic marker in acute myeloid leukemia
Leukemia. (2016)
doi: 10.1038/leu.2016.265
Redko Y. et al.
RNase J depletion leads to massive changes in mRNA abundance in Helicobacter pylori
RNA Biol. (2016) 13(2):243-53
doi: 10.1080/15476286.2015.1132141
Bandiera S. et al.
HCV-induced up-regulation of miR-146a-5p in hepatocytes promotes viral infection and deregulates metabolic pathways associated with liver disease pathogenesis
J Virol (2016) 90(14):6387-400
doi: 10.1128/JVI.00619-16
Bernut A. et al.
Insights into the smooth-to-rough transitioning in Mycobacterium bolletii unravels a functional Tyr residue conserved in all mycobacterial MmpL family members
Mol Microbiol. (2016) 99(5):866-83
doi: 10.1111/mmi.13283
Popa A. et al.
RiboProfiling: a Bioconductor package for standard Ribo-seq pipeline processing
F1000Res. (2016) 5:1309
doi: 10.12688/f1000research.8964
Guerin C. et al.
Gene coexpression network analysis of oil biosynthesis in an interspecific backcross of oil palm
Plant J. (2016) 87:423-41
doi: 10.1111/tpj.13208
O'Grady GL. et al.
Variants in the Oxidoreductase PYROXD1 Cause Early-Onset Myopathy with Internalized Nuclei and Myofibrillar Disorganization
Am J Hum Genet. (2016) .99(5):1086-1105
doi: 10.1016/j.ajhg.2016.09.005
Galindo-Albarrán AO. et al.
CD8+ T Cells from Human Neonates Are Biased toward an Innate Immune Response
Cell reports. (2016)
doi: 10.1016/j.celrep.10.056
Freyermuth F. et al.
Splicing misregulation of SCN5A contributes to cardiac-conduction delay and heart arrhythmia in myotonic dystrophy
Nat Commun. (2016) 7: 11067
doi: 10.1038/ncomms11067