Publications 2017

Alberti A. et al.
Viral to metazoan marine plankton nucleotide sequences from the Tara Oceans expedition.
Scientific Data (2017) Aug. 4, e170093,
doi: 10.1038/sdata.2017.93

Baratin M. et al.
T Cell zone resident macrophages silently dispose of apoptotic cells in the lymph node.
Immunity (2017) Aug. 47(2):349-362.e5.
doi: 10.1016/j.immuni.2017.07.019

Echaniz-Laguna A. et al.
HSPB8 haploinsufficiency causes dominant adult-onset axial and distal myopathy.
Acta Neuropathol. (2017) Jul.134(1):163-165.
doi: 10.1007/s00401-017-1724-8

Bruel AL. et al.
Fifteen years of research on oral-facial-digital syndromes: from 1 to 16 causal genes.
J Med Genet. (2017) Jun. 54(6):371-380.
doi: 10.1136/jmedgenet-2016-104436

Papin C. et al.
Combinatorial DNA methylation codes at repetitive elements.
Genome Res. (2017) Jun. 27(6):934-946.
doi: 10.1101/gr.213983.116

Faucon F. et al.
In the hunt for genomic markers of metabolic resistance to pyrethroids in the mosquito Aedes aegypti: An integrated next-generation sequencing approach.
PLoS Negl. Trop. Dis. (2017) Apr. 11(4):e0005526.
doi: 10.1371/journal.pntd.0005526

Tost J. et al.
Epigenetics of the immune system and alterations in inflammation and autoimmunity Foreword.
Epigenomics (2017) Apr. 9(4):371-373.
doi: 10.2217/epi-2017-0026

Bussard A. et al.
Physiological adjustments and transcriptome reprogramming are involved in the acclimation to salinity gradients in diatoms:
Environmental Microbiol. (2017) Mar. 19(3):909-925.
doi: 10.1111/1462-2920.13398

Bourgeois YXC. et al.
A novel locus on chromosome 1 underlies the evolution of a melanic plumage polymorphism in a wild songbird.
R Soc Open Sci. (2017) Feb. 4(2):160805.
doi: 10.1098/rsos.160805

Sierra B. et al.
OSBPL10, RXRA and lipid metabolism confer African-ancestry protection against dengue haemorrhagic fever in admixed Cubans.
PLoS Pathog. (2017) Feb. 13(2):e1006220.
doi: 10.1371/journal.ppat.1006220

Ebenau-Jehle C. et al.
An unusual strategy for the anoxic biodegradation of phthalate.
ISME J. (2017) Jan.11(1):224-236.
doi: 10.1038/ismej.2016.91

Terrat S. et al.
Correction: Mapping and predictive variations of soil bacterial richness across France.
PLoS One (2017) Dec. 12(12):e0190128.
doi: 10.1371/journal.pone.0190128

Letouze E. et al.
Mutational signatures reveal the dynamic interplay of risk factors and cellular processes during liver tumorigenesis.
Nat Commun. (2017) Nov. 8(1):1315.
doi: 10.1038/s41467-017-01358-x

Milet C. et al.
Egr1 deficiency induces browning of inguinal subcutaneous white adipose tissue in mice.
Sci. Rep. (2017) Nov. 7(1):16153.
doi: 10.1038/s41598-017-16543-7

Gervais J. et al.
Different waves of effector genes with contrasted genomic location are expressed by Leptosphaeria maculans during cotyledon and stem colonization of oilseed rape.
Mol Plant Pathol. (2017) Oct. 18(8):1113-1126.
doi: 10.1111/mpp.12464

Martin G. et al.
Evolution of the Banana genome (Musa acuminata) is Impacted by large chromosomal translocations.
Mol Biol Evol. (2017) Sep. 34(9):2140-2152.
doi: 10.1093/molbev/msx164

Galia W. et al.
Strand-specific transcriptomes of Enterohemorrhagic Escherichia coli in response to interactions with ground beef microbiota: interactions between microorganisms in raw meat.
BMC Genomics (2017) Aug. 18(1):574.
doi: 10.1186/s12864-017-3957-2

Blanc-Mathieu R. et al.
Population genomics of picophytoplankton unveils novel chromosome hypervariability.
Sci Adv. (2017) Jul. 3(7): e1700239.
doi: 10.1126/sciadv.1700239

Engel M. et al.
Influence of lung CT changes in chronic obstructive pulmonary disease (COPD) on the human lung microbiome.
PLoS One (2017) Jul. 12(7):e0180859.
doi: 10.1371/journal.pone.0180859

Pincez T. et al.
Feasibility and clinical integration of molecular profiling for target identification in pediatric solid tumors.
Pediatr Blood Cancer (2017) Jun. 64(6).
doi: 10.1002/pbc.26365

Contrepois K. et al.
Histone variant H2A.J accumulates in senescent cells and promotes inflammatory gene expression.
Nat Commun. (2017) May. 8:14995.
doi: 10.1038/ncomms14995

Marchetti M. et al.
Experimental evolution of rhizobia may lead to either extra- or intracellular symbiotic adaptation depending on the selection regime.
Mol. Ecol. (2017) Apr. 26(7):1818-1831.
doi: 10.1111/mec.13895

Leroy T. et al.
Extensive recent secondary contacts between four European white oak species.
New Phytol. (2017) Apr. 214(2):865-878.
doi: 10.1111/nph.14413

Boulay AC. et al.
Translation in astrocyte distal processes sets molecular heterogeneity at the gliovascular interface.
Cell Discov. (2017) Mar. 3:17005.
doi: 10.1038/celldisc.2017.5

Cabau C. et al.
Compacting and correcting Trinity and Oases RNA-Seq de novo assemblies.
PeerJ. (2017) Feb. 5: e2988.
doi: 10.7717/peerj.2988

Witkowski B. et al.
A surrogate marker of piperaquine-resistant Plasmodium falciparum malaria: a phenotype-genotype association study.
Lancet Infect Dis. (2017) Feb. 17(2):174-183.
doi: 10.1016/S1473-3099(16)30415-7

Monat C. et al.
De novo assemblies of three Oryza glaberrima accessions provide first insights about pan-genome of african rices.
Genome Biol Evol. (2017) Jan 1. 9(1):1-6.
doi: 10.1093/gbe/evw253

Pham N-P. et al.
Comparative genomic analysis of Brevibacterium strains: insights into key genetic determinants involved in adaptation to the cheese habitat.
BMC Genomics (2017) Dec. 18(1):955.
doi: 10.1186/s12864-017-4322-1

Machiela MJ. et al.
Genetic variants related to longer telomere length are associated with increased risk of Renal Cell Carcinoma.
Europ. Urol. (2017) Nov. 72 (5): 747-754
doi: 10.1016/j.eururo.2017.07.015

Medina C. et al.
Characterization of microRNAs from Arabidopsis galls highlights a role for miR159 in the plant response to the root-knot nematode Meloidogyne incognita.
New Phytol. (2017) Nov. 216(3):882-896.
doi: 10.1111/nph.14717