Publications 2015

Lluch J. et al.
The Characterization of Novel Tissue Microbiota Using an Optimized 16S Metagenomic Sequencing Pipeline
PLoS One. 2015 Nov 6;10(11):e0142334
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Depaquit J. et al.
Mitochondrial DNA Intraspecific Variability in Sergentomyia minuta (Diptera : Psychodidae)
Journal of Medical Entomology. 2015, 52(5):819-828
doi:

Le Bescot N. et al.
Global patterns of pelagic dinoflagellate diversity across protist size classes unveiled by metabarcoding
Environmental Microbiology. 2015
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Sayavedra L. et al.
Abundant toxin-related genes in the genomes of beneficial symbionts from deep-sea hydrothermal vent mussels
Elife. 2015 4 :e07966
doi:

Garcin G, Guiraud I, Lacroix M, Genthon C, Rialle S, Joujoux JM, Meunier L, Lavabre-Bertrand T, Stoebner PE, Le Gallic L
(2015) AMPK/HuR-Driven IL-20 Post-Transcriptional Regulation in Psoriatic Skin
J Invest Dermatol. 2015 135:2732-41
doi:

Smith M.J. et al.
Mutations in LZTR1 add to the complex heterogeneity of schwannomatosis
Neurology. 2015
doi:

Lichius A. et al.
Genome sequencing of the Trichoderma reesei QM9136 mutant identifies a truncation of the transcriptional regulator XYR1 as the cause for its cellulase-negative phenotype
BMC Genomics. 2015 Apr 20;16:326
doi:

Pesant S. et al.
Open science resources for the discovery and analysis of Tara Oceans data
Scientific data. 2015 2:150023.
doi: 10.1038/sdata.2015.23

Laureau, R. et al.
Extensive Recombination of a Yeast Diploid Hybrid through Meiotic Reversion
PLoS Genetics.
doi: 10.1371/journal.pgen.1006283

Mirzaa GM. et al.
Characterisation of mutations of the phosphoinositide-3-kinase regulatory subunit, PIK3R2, in perisylvian polymicrogyria: a next-generation sequencing study
Lancet Neurol. 2015, 14 (12): p. 1182-1195
doi: 10.1016/S1474-4422(15)00278

Dumas P. et al.
Spodoptera frugiperda (Lepidoptera : Noctuidae) host-plant variants : two host strains or two distinct species ?
Genetica. 2015, 143(3):305-316
doi:

esur I. et al.
The oak gene expression atlas : insights into Fagaceae genome evolution and the discovery of genes regulated during bud dormancy release
Bmc Genomics. 2015, 16:112
doi:

Sunagawa S. et al.
Tara Oceans C,Structure and function of the global ocean microbiome
Science. 2015 348(6237):1261359
doi:

Audo R. et al.
Identification of genes regulating TRAIL-induced apoptosis in rheumatoid arthritis fibroblasts-like synoviocytes
Genes Immun. 2015 16:462-9
doi:

Manfrini N. et al.
RNA-processing proteins regulate Mec1/ATR activation by promoting generation of RPA-coated ssDNA
EMBO Rep. 2015
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Thierry A. et al.
Macrotene chromosomes provide insights to a new mechanism of high-order gene amplification in eukaryotes
Nat Commun.2015 Jan 30;6:6154
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Biryukova I. et al.
Endogenous siRNAs and piRNAs derived from transposable elements and genes in the malaria vector mosquito Anopheles gambiae
BMC Genomics. 2015 Apr 10;16:278
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Kocher A. et al.
Complete mitochondrial genome of Lutzomyia (Nyssomyia) umbratilis (Diptera: Psychodidae), the main vector of Leishmania guyanensis
Mitochondrial DNA. 2015 May 22:1-3
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Sacco E. et al.
Mutation landscape of acquired cross-resistance to glycopeptide and ?-lactam antibiotics in Enterococcus faecium
Antimicrob Agents Chemother.2015 Sep;59(9):5306-15
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Portal MM. et al.
TARDIS, a targeted RNA directional sequencing method for rare RNA discovery
Nat Protoc. 2015 Dec;10(12):1915-38
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Esquer-Garrigos Y. et al.
Detecting natural hybridization between two vulnerable Andean pupfishes (Orestias agassizii and O-luteus) representative of the Altiplano endemic fisheries
Conservation Genetics. 2015, 16(3):717-727
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Lima-Mendez G. et al.
Determinants of community structure in the global plankton interactome
Science 2015, 348(6237):1262073
doi:

Terrat S. et al.
Improving soil bacterial taxa-area relationships assessment using DNA meta-barcoding
Heredity. 2015, 114(5):468-475
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Bertrand B. et al.
The greater phenotypic homeostasis of the allopolyploid Coffea arabica improved the transcriptional homeostasis over that of both diploid parents
Plant Cell Physiol. 2015 56:2035-51
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Libertini E. et al.
Overexpression of the Heterochromatinization Factor BAHD1 in HEK293 Cells Differentially Reshapes the DNA Methylome on Autosomes and X Chromosome
Front Genet. 2015 1;6:339
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Cottrez F. et al.
SENS-IS, a 3D reconstituted epidermis based model for quantifying chemical sensitizationpotency: Reproducibility and predictivity results from an inter-laboratory study
Toxicol In Vitro.. 2016 Jan 18;32:248-260
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Bouvet P. et al.
Foot infection by Clostridium sordellii: case report and review of 15 cases in France
J Clin Microbiol. 2015 Apr;53(4):1423-7
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Brum JR. et al.
Tara Oceans C,Patterns and ecological drivers of ocean viral communities
Science. 2015 348(6237):1261498.1261491-1261498.1261410.
doi: 10.1126/science.aah6502

Chevalier B. et al.
miR-34/449 control apical actin network formation during multiciliogenesis through small GTPase pathways
Nat Commun.2015 Sep 18;6:8386
doi:

Siudeja K. et al.
Frequent Somatic Mutation in Adult Intestinal StemCells Drives Neoplasia and Genetic Mosaicism during Aging
Cell Stem Cell.
doi: 10.1016/j.stem.2015.09.016