Publications 2015

Thierry A. et al.
Macrotene chromosomes provide insights to a new mechanism of high-order gene amplification in eukaryotes
Nat Commun.2015 Jan 30;6:6154

Biryukova I. et al.
Endogenous siRNAs and piRNAs derived from transposable elements and genes in the malaria vector mosquito Anopheles gambiae
BMC Genomics. 2015 Apr 10;16:278

Kocher A. et al.
Complete mitochondrial genome of Lutzomyia (Nyssomyia) umbratilis (Diptera: Psychodidae), the main vector of Leishmania guyanensis
Mitochondrial DNA. 2015 May 22:1-3

Sacco E. et al.
Mutation landscape of acquired cross-resistance to glycopeptide and ?-lactam antibiotics in Enterococcus faecium
Antimicrob Agents Chemother.2015 Sep;59(9):5306-15

Portal MM. et al.
TARDIS, a targeted RNA directional sequencing method for rare RNA discovery
Nat Protoc. 2015 Dec;10(12):1915-38

Esquer-Garrigos Y. et al.
Detecting natural hybridization between two vulnerable Andean pupfishes (Orestias agassizii and O-luteus) representative of the Altiplano endemic fisheries
Conservation Genetics. 2015, 16(3):717-727

Lima-Mendez G. et al.
Determinants of community structure in the global plankton interactome
Science 2015, 348(6237):1262073

Terrat S. et al.
Improving soil bacterial taxa-area relationships assessment using DNA meta-barcoding
Heredity. 2015, 114(5):468-475

Bertrand B. et al.
The greater phenotypic homeostasis of the allopolyploid Coffea arabica improved the transcriptional homeostasis over that of both diploid parents
Plant Cell Physiol. 2015 56:2035-51

Libertini E. et al.
Overexpression of the Heterochromatinization Factor BAHD1 in HEK293 Cells Differentially Reshapes the DNA Methylome on Autosomes and X Chromosome
Front Genet. 2015 1;6:339

Cottrez F. et al.
SENS-IS, a 3D reconstituted epidermis based model for quantifying chemical sensitizationpotency: Reproducibility and predictivity results from an inter-laboratory study
Toxicol In Vitro.. 2016 Jan 18;32:248-260

Bouvet P. et al.
Foot infection by Clostridium sordellii: case report and review of 15 cases in France
J Clin Microbiol. 2015 Apr;53(4):1423-7

Brum JR. et al.
Tara Oceans C,Patterns and ecological drivers of ocean viral communities
Science. 2015 348(6237):1261498.1261491-1261498.1261410.
doi: 10.1126/science.aah6502

Chevalier B. et al.
miR-34/449 control apical actin network formation during multiciliogenesis through small GTPase pathways
Nat Commun.2015 Sep 18;6:8386

Siudeja K. et al.
Frequent Somatic Mutation in Adult Intestinal StemCells Drives Neoplasia and Genetic Mosaicism during Aging
Cell Stem Cell.
doi: 10.1016/j.stem.2015.09.016

Farasin J. et al.
Thiomonas sp CB2 is able to degrade urea and promote toxic metal precipitation in acid mine drainage waters supplemented with urea
Frontiers in Microbiology. 2015, 6:993

Loux V. et al.
Mutations and genomic islands can explain the strain dependency of sugar utilization in 21 strains of Propionibacterium freudenreichii
Bmc Genomics. 2015 16(1):296

Veron G. et al.
Systematics of the Southeast Asian mongooses (Herpestidae, Carnivora) : solving the mystery of the elusive collared mongoose and Palawan mongoose
Zoological Journal of the Linnean Society 2015, 173(1):236-248

Roquis D. et al.
The epigenome of Schistosoma mansoni provides insight about how Cercariae poise transcription until infection
PLoS Negl Trop Dis. 2015 9:e0003853

Balloy V. et al.
Normal and Cystic Fibrosis Human Bronchial Epithelial Cells Infected with Pseudomonas aeruginosa Exhibit Distinct Gene Activation Patterns
PLoS One. 2015 10(10):e014097

Boulay AC. et al.
The Sarcoglycan complex is expressed in the cerebrovascular system and is specifically regulated by astroglial Cx30 channels
Front Cell Neurosci. 2015 Feb 2;9:9

Koechler S. et al.
Constitutive arsenite oxidase expression detected in arsenic-hypertolerant Pseudomonas xanthomarina S11
Res Microbiol. 2015 Apr;166(3):205-14

Leroy P. et al.
Inflammatory and repair pathways induced in human bronchoalveolarlavage cells with ozone inhalation
PLoS One. 2015 Jun 2;10(6):e0127283

Legendre M. et al.
In-depth study of Mollivirus sibericum, a new 30,000-y-old giant virus infecting Acanthamoeba
Proc Nat Acad Sci U.S.A. 2015 112(38) :E5327-E5335.
doi: 10.1073/pnas.1510795112

Rupp R. et al.
A Point Mutation in Suppressor of Cytokine Signalling 2 (Socs2) Increases the Susceptibility to Inflammation of the Mammary Gland while Associated with Higher Body Weight and Size and Higher Milk Production in a Sheep Model
PLoS Genet. 2015 Dec 11;11(12):e1005629

Fontanillas E. et al.
Degeneration of the Nonrecombining Regions in the Mating-Type Chromosomes of the Anther-Smut Fungi
Molecular Biology and Evolution. 2015, 32(4):928-943

Madoui MA. et al.
MaGuS : a tool for map-guided scaffolding and quality assessment of genome assemblies
Biorxiv 2015

Villar E. et al.
Tara Oceans Environmental characteristics of Agulhas rings affect interocean plankton transport
Science. 2015, 348(6237):1261447

Combes MC. et al.
Regulatory divergence between parental alleles determines gene expression patterns in hybrids
Genome Biol Evol. 2015 7:1110-21

Rosinski-Chupin I. et al.
Single nucleotide resolution RNA-seq uncovers new regulatory mechanisms in the opportunistic pathogen Streptococcus agalactiae
BMC Genomics. 2015 16:419