Publications 2015

Pieretti I. et al.
Draft Genome Sequence of Xanthomonas sacchari Strain LMG 476
Genome announcements. 2015, 3(2) : e00146-15

Bond J. et al.
An Early Thymic Precursor Phenotype Predicts Outcome Exclusively in HOXA-overexpressing Adult T-ALL: a GRAALL Study
The Lancet Haematology 2015

Lebofsky R. et al.
Circulating tumor DNA as a non-invasive substitute to metastasis biopsy for tumor genotyping and personalized medicine in a prospective trial across all tumor types
Molecular Oncology. 2015

Laurette P. et al.
Transcription factor MITF and remodeller BRG1 define chromatin organisation at regulatory elements in melanoma cells
Elife. 2015 Mar 24;4

de Vargas C. et al.
Tara Oceans C,Eukaryotic plankton diversity in the sunlit ocean
Science. 2015, 348(6237):1261605.
doi: 10.1126/science.1261605

Urban S. et al.
A Brn2-Zic1 axis specifies the neuronal fate of retinoic-acid-treated embryonic stem cells.
J Cell Sci. 2015 Jul 1;128(13):2303-18

Weber AA. et al. .
Influence of the larval phase on connectivity: strong differences in the genetic structure of brooders and broadcasters in the Ophioderma longicauda species complex
Mol Ecol. 2015 Nov 7.
doi: 10.1111/mec.13456

Chateigner A. et al.
Ultra Deep Sequencing of a Baculovirus Population Reveals Widespread Genomic Variations
Viruses-Basel. 2015, 7(7):3625-3646

Halter D. et al.
Arsenic hypertolerance in the protist Euglena mutabilis is mediated by specific transporters and functional integrity maintenance mechanisms
Environmental Microbiology 2015, 17(6):1941-1949

Pingault L. et al.
Deep transcriptome sequencing provides new insights into the structural and functional organization of the wheat genome
Genome Biology 2015, 16:29

Bai Q et al.
Temporal analysis of genome alterations induced by single-cell passaging in human embryonic stem cells
Stem Cells Dev. 2015 24:653-62

Madic J. et al.
Circulating tumor DNA and circulating tumor cells in metastatic triple negative breast cancer patients
Int. J. Cancer. 2015

Sanulli S. et al.
Jarid2 Methylation via the PRC2 Complex Regulates H3K27me3 Deposition during Cell Differentiation
Mol. Cell.
doi: 10.1016/j.molcel.2014.12.020

Chen H. et al.
Reinforcement of STAT3 activity reprogrammes human embryonic stem cells to naive-like pluripotency
Nat Commun. 2015 May 13;6:7095

Gresset A. et al.
Boundary Caps Give Rise to Neurogenic Stem Cells and Terminal Glia in the Skin
Stem Cell Reports.. 2015 Aug 11;5(2):278-90

Tourneau, C.L et al.
Molecularly targeted therapy based on tumour molecular profiling versus conventional therapy for advanced cancer (SHIVA): a multicentre, open-label, proof-of-concept, randomised, controlled phase 2 trial
Lancet Oncol.
doi: 10.1016/S1470-2045(15)00188-6

Chevignon G. et al.
Transcriptomic response of Manduca sexta immune tissues to parasitization by the bracovirus associated wasp Cotesia congregata
Insect Biochemistry and Molecular Biology. 2015, 62:86-99

Hespeels B. et al.
Against All Odds : Trehalose-6-Phosphate Synthase and Trehalase Genes in the Bdelloid Rotifer Adineta vaga Were Acquired by Horizontal Gene Transfer and Are Upregulated during Desiccation
PLoS One. 2015, 10(7) :e0131313

Plomion C. et al.
Decoding the oak genome : public release of sequence data, assembly, annotation and publication strategies
Molecular Ecology Resources 2015

Delaby Cet al.
Central Nervous System and Peripheral Inflammatory Processes in Alzheimer's Disease: Biomarker Profiling Approach
Front Neurol. 2015 6:181

Grünewald, T.G.P. et al.
Chimeric EWSR1-FLI1 regulates the Ewing sarcoma susceptibility gene EGR2 via a GGAA microsatellite
Nature Genetics. 2015

Mazuet C. et al.
Draft Genome Sequence of Clostridium botulinum Strain 277-00 Type B2
Genome Announc.2015 Apr 2;3(2). pii: e00211-15

Bork P. et al.
Tara Oceans studies plankton at PLANETARY SCALE
Science.2015 348(6237):873-873.
doi: 10.1126/science.aac5605

Eleveld, T.F. et al.
Relapsed neuroblastomas show frequent RAS-MAPK pathway mutations
Nature Genetics.
doi: 10.1038/ng.3333

Ravens S. et al.
Tip60 complex binds to active Pol II promoters and a subset of enhancers and co-regulates the c-Myc network in mouse embryonic stem cells
Epigenetics Chromatin. 2015 Nov 6;8:45.
doi: 10.1186/s13072-015-0039-z

Clerissi C. et al.
Deep sequencing of amplified Prasinovirus and host green algal genes from an Indian Ocean transect reveals interacting trophic dependencies and new genotypes
Environmental Microbiology Reports. 2015, 7(6):979-989

Jacquet F. et al.
Phylogeography and evolutionary history of the Crocidura olivieri complex (Mammalia, Soricomorpha) : from a forest origin to broad ecological expansion across Africa
Bmc Evolutionary Biology. 2015, 15:71

Rollat-Farnier PA. et al.
Two Host Clades, Two Bacterial Arsenals : Evolution through Gene Losses in Facultative Endosymbionts
Genome Biology and Evolution. 2015, 7(3):839-855

Ozmadenci D. et al.
Netrin-1 regulates somatic cell reprogramming and pluripotency maintenance
Nat Commun. 2015 6:7398

Bellini A. et al.
Deep sequencing reveals occurrence of sub-clonal ALK mutations in neuroblastoma at diagnosis
Clin. Cancer Res. 2015