Publications 2018

Raymond O et al.

The Rosa genome provides new insights into the domestication of modern roses.

Nat Genet. 2018 50(6)

 doi: 10.1038/s41588-018-0110-3.


Duval C et al.
Phylogeny and salt-tolerance of freshwater Nostocales strains: Contribution to their systematics and evolution
Harmful Algae 2018 73
doi: 10.1016/j.hal.2018.01.008

Ropars J et al.
Gene flow contributes to diversification of the major fungal pathogen Candida albicans
Nature Communications 2018 9(1)
doi: 10.1038/s41467-018-04787-4

Castagnola S et al.
New Insights Into the Role of Cav2 Protein Family in Calcium Flux Deregulation in Fmr1-KO Neurons
Frontiers in Molecular Neuroscience 2018 11
doi: 10.3389/fnmol.2018.00342

Furlan G et al.
The Ftx Noncoding Locus Controls X Chromosome Inactivation Independently of Its RNA Products
Mol Cell. 2018 70(3)
doi: 10.1016/j.molcel.2018.03.024

Watson S et al.
Transcriptomic definition of molecular subgroups of small round cell sarcomas
The Journal of Pathology 2018 245(1)
doi: 10.1002/path.5053

Bis JC et al.
Whole exome sequencing study identifies novel rare and common Alzheimer's-Associated variants involved in immune response and transcriptional regulation
Molecular Psychiatry 2018
doi: 10.1038/s41380-018-0112-7

Diop G et al.
Genetic variants of RNASE3 (ECP) and susceptibility to severe malaria in Senegalese population
Malaria Journal 2018 17(1)
doi: 10.1186/s12936-018-2205-9

Mauger F et al.
Enrichment of methylated molecules using enhanced-ice-co-amplification at lower denaturation temperature-PCR (E-ice-COLD-PCR) for the sensitive detection of disease-related hypermethylation.
Epigenomics 2018 10(5)
doi: 10.2217/epi-2017-0166

Wang-Renault SF et al.
Deregulation of microRNA expression in purified T and B lymphocytes from patients with primary Sjögren's syndrome
Annals of the Rheumatic Diseases 2017 77(1)
doi: 10.1136/annrheumdis-2017-211417

Maikova A et al.
Discovery of new type I toxin–antitoxin systems adjacent to CRISPR arrays in Clostridium difficile
Nucleic Acids Research 2018 46(9)
doi: 10.1093/nar/gky124

Ogiyama Y et al.
Polycomb-Dependent Chromatin Looping Contributes to Gene Silencing during Drosophila Development
Molecular Cell 2018 71(1
doi: 10.1016/j.molcel.2018.05.032

Kincaid-Smith J et al.
Parent-of-Origin-Dependent Gene Expression in Male and Female Schistosome Parasites
Genome Biology and Evolution 2018 10(3)
doi: 10.1093/gbe/evy037

Aigle A et al.
The nature of the electron acceptor (MnIV/NO3) triggers the differential expression of genes associated with stress and ammonium limitation responses in Shewanella algae C6G3
FEMS Microbiology Letters 2018 365(13)
doi: 10.1093/femsle/fny068

Proust L et al.
Complete Genome Sequence of the Industrial Fast-Acidifying Strain Streptococcus thermophilus N4L
Microbiology Resource Announcements 2018 7(8)
doi: 10.1128/MRA.01029-18

Darde TA et al.
The ReproGenomics Viewer: a multi-omics and cross-species resource compatible with single-cell studies for the reproductive science community
Bioinformatics 2019
doi: 10.1093/bioinformatics/btz047

Teyssier A et al.
Inside the guts of the city: Urban-induced alterations of the gut microbiota in a wild passerine
Science of The Total Environment 2018 612
doi: 10.1016/j.scitotenv.2017.09.035

Cabanettes F et al.
D-GENIES: dot plot large genomes in an interactive, efficient and simple way
PeerJ 2018 6
doi: 10.7717/peerj.4958

Gaulin E et al.
Genomics analysis of Aphanomyces spp. identifies a new class of oomycete effector associated with host adaptation
BMC Biology 2018 16(1)
doi: 10.1186/s12915-018-0508-5

Duron O et al.
Tick-Bacteria Mutualism Depends on B Vitamin Synthesis Pathways
Current Biology 2018 28(12)
doi: 10.1016/j.cub.2018.04.038

Farhat S et al.
Comparative Time-Scale Gene Expression Analysis Highlights the Infection Processes of Two Amoebophrya Strains
Frontiers in Microbiology 2018 9
doi: 10.3389/fmicb.2018.02251

Seeleuthner Y et al.
Single-cell genomics of multiple uncultured stramenopiles reveals underestimated functional diversity across oceans
Nature Communications 2018 9(1)
doi: 10.1038/s41467-017-02235-3

Falk AT et al.
Effect of mutant variants of the KRAS gene on PD-L1 expression and on the immune microenvironment and association with clinical outcome in lung adenocarcinoma patients
Lung Cancer 2018 121
doi: 10.1016/j.lungcan.2018.05.009

Greenberg M et al.
Dynamic enhancer partitioning instructs activation of a growth regulator during exit from naïve pluripotency
Cold Spring Harbor Laboratory 2018
doi: 10.1101/441824

Watts BR et al.
Histone deacetylation promotes transcriptional silencing at facultative heterochromatin
Nucleic Acids Research 2018 46(11)
doi: 10.1093/nar/gky232

Böhm J et al.
Novel ASCC1 mutations causing prenatal-onset muscle weakness with arthrogryposis and congenital bone fractures
Journal of Medical Genetics 2018
doi: 10.1136/jmedgenet-2018-105390

Geoffroy V et al.
Whole-genome sequencing in patients with ciliopathies uncovers a novel recurrent tandem duplication in IFT140
Human Mutation 2018 39(7)
doi: 10.1002/humu.23539

Perron G et al.
A General Framework for Interrogation of mRNA Stability Programs Identifies RNA-Binding Proteins that Govern Cancer Transcriptomes
Cell Reports 2018 23(6)
doi: 10.1016/j.celrep.2018.04.031

Weber A et al.
Epigenome-wide DNA methylation profiling in Progressive Supranuclear Palsy reveals major changes at DLX1
Nature Communications 2018 9(1)
doi: 10.1038/s41467-018-05325-y

Janezic S et al.
Comparative Genomics of Clostridium difficile
Springer International Publishing 2018
doi: 10.1007/978-3-319-72799-8_5