Publications 2018

Plainvert C et al.
A clone of the emergent Streptococcus pyogenes emm89 clade responsible for a large outbreak in a post-surgery oncology unit in France
Medical Microbiology and Immunology 2018 207(5-6)
doi: 10.1007/s00430-018-0546-1

Raymond O et al.

The Rosa genome provides new insights into the domestication of modern roses.

Nat Genet. 2018 50(6)

 doi: 10.1038/s41588-018-0110-3.


Arsène-Ploetze F et al.
Adaptation in toxic environments: comparative genomics of loci carrying antibiotic resistance genes derived from acid mine drainage waters
Environmental Science and Pollution Research 2017 25(2)
doi: 10.1007/s11356-017-0535-8

Legendre M et al.
Diversity and evolution of the emerging Pandoraviridae family
Nature Communications 2018 9(1)
doi: 10.1038/s41467-018-04698-4

Duployez N et al.
The stem cell-associated gene expression signature allows risk stratification in pediatric acute myeloid leukemia
Leukemia 2018 33(2)
doi: 10.1038/s41375-018-0227-5

Chang KW et al.
Stage-dependent piRNAs in chicken implicated roles in modulating male germ cell development
BMC Genomics 2018 19(1)
doi: 10.1186/s12864-018-4820-9

Marangoni E et al.
Capecitabine Efficacy Is Correlated with TYMP and RB1 Expression in PDX Established from Triple-Negative Breast Cancers
Clinical Cancer Research 2018 24(11)
doi: 10.1158/1078-0432.CCR-17-3490

Assoum M et al.
Further delineation of the clinical spectrum of de novo TRIM8 truncating mutations
American Journal of Medical Genetics Part A 2018 176(11)
doi: 10.1002/ajmg.a.40357

Czimmerer Z et al.
The Transcription Factor STAT6 Mediates Direct Repression of Inflammatory Enhancers and Limits Activation of Alternatively Polarized Macrophages
Immunity 2018 48(1)
doi: 10.1016/j.immuni.2017.12.010

Khan W et al.
MACARON: a python framework to identify and re-annotate multi-base affected codons in whole genome/exome sequence data
Bioinformatics 2018 34(19)
doi: 10.1093/bioinformatics/bty382

Stoeklé HC et al.
La propriété des données génétiques
Médecine/Sciences 2018 34(12)
doi: 10.1051/medsci/2018291

El Nagar S et al.
A new genetically engineered mouse model of choroid plexus carcinoma
Biochemical and Biophysical Research Communications 2018 496(2)
doi: 10.1016/j.bbrc.2017.11.192

Ates LS et al.
Unexpected Genomic and Phenotypic Diversity of Mycobacterium africanum Lineage 5 Affects Drug Resistance, Protein Secretion, and Immunogenicity
Genome Biology and Evolution 2018 10(8)
doi: 10.1093/gbe/evy145

Albert E et al.
Allele-specific expression and genetic determinants of transcriptomic variations in response to mild water deficit in tomato
The Plant Journal 2018 96(3
doi: 10.1111/tpj.14057

Indersie E et al.
Tracking cellular and molecular changes in a species-specific manner during experimental tumor progression $?ess$i$greater$in vivo$?ess$/i$greater$
Oncotarget 2018 9(22)
doi: 10.18632/oncotarget.24598

Duchaud E et al.
Genomic Diversity and Evolution of the Fish Pathogen Flavobacterium psychrophilum
Frontiers in Microbiology 2018 9
doi: 10.3389/fmicb.2018.00138

Belkhelfa S et al.
Complete Genome Sequence of the Facultative Methylotroph
Methylobacterium extorquens
TK 0001 Isolated from Soil in Poland
Genome Announcements 2018 6(8)
doi: 10.1128/genomeA.00018-18

Ledoux JB et al.
Postglacial range expansion shaped the spatial genetic structure~in a marine habitat-forming species: Implications for conservation plans in the Eastern Adriatic Sea
Journal of Biogeography 2018 45(12)
doi: 10.1111/jbi.13461

Rahimova R et al.
Identification of allosteric inhibitors of the ecto-5?-nucleotidase (CD73) targeting the dimer interface
PLOS Computational Biology 2018 14(1)
doi: 10.1371/journal.pcbi.1005943

Vizziano-Cantonnet D et al.
De novo transcriptome analysis to search for sex-differentiation genes in the Siberian sturgeon
General and Comparative Endocrinology 2018 268
doi: 10.1016/j.ygcen.2018.08.007

Willmann C et al.
Oral health status in historic population: Macroscopic and metagenomic evidence
PLOS ONE 2018 13(5)
doi: 10.1371/journal.pone.0196482

Belser C et al.
Chromosome-scale assemblies of plant genomes using nanopore long reads and optical maps
Nature Plants 2018 4(11)
doi: 10.1038/s41477-018-0289-4

Legras JL et al.
Adaptation of S. cerevisiae to Fermented Food Environments Reveals Remarkable Genome Plasticity and the Footprints of Domestication
Molecular Biology and Evolution 2018 35(7)
doi: 10.1093/molbev/msy066

Vandenbussche C et al.
Tacrolimus-induced nephrotoxicity in mice is associated with microRNA deregulation
Archives of Toxicology 2018 92(4)
doi: 10.1007/s00204-018-2158-3

Chicard M et al.
Whole-Exome Sequencing of Cell-Free DNA Reveals Temporo-spatial Heterogeneity and Identifies Treatment-Resistant Clones in Neuroblastoma
Clinical Cancer Research 2017 24(4)
doi: 10.1158/1078-0432.CCR-17-1586

Melloni GEM et al.
Precision Trial Drawer, a Computational Tool to Assist Planning of Genomics-Driven Trials in Oncology
JCO Precision Oncology 2018 2
doi: 10.1200/PO.18.00015

Aubart M et al.
Association of modifiers and other genetic factors explain Marfan syndrome clinical variability
European Journal of Human Genetics 2018 26(12)
doi: 10.1038/s41431-018-0164-9

Czimmerer Z et al.
Extensive and functional overlap of the STAT6 and RXR cistromes in the active enhancer repertoire of human CD14$mathplus$ monocyte derived differentiating macrophages
Molecular and Cellular Endocrinology 2018 471
doi: 10.1016/j.mce.2017.07.034

Laugel-Haushalter V et al.
Genetic Evidence Supporting the Role of the Calcium Channel, CACNA1S, in Tooth Cusp and Root Patterning
Frontiers in Physiology 2018 9
doi: 10.3389/fphys.2018.01329

Tost J et al.
Epigenetic plasticity of eosinophils and other immune cell subsets in childhood asthma
The Lancet Respiratory Medicine 2018 6(5)
doi: 10.1016/s2213-2600(18)30051-1