Publications 2015

Lichius A. et al.
Genome sequencing of the Trichoderma reesei QM9136 mutant identifies a truncation of the transcriptional regulator XYR1 as the cause for its cellulase-negative phenotype
BMC Genomics. 2015 Apr 20;16:326

Pesant S. et al.
Open science resources for the discovery and analysis of Tara Oceans data
Scientific data. 2015 2:150023.
doi: 10.1038/sdata.2015.23

Laureau, R. et al.
Extensive Recombination of a Yeast Diploid Hybrid through Meiotic Reversion
PLoS Genetics.
doi: 10.1371/journal.pgen.1006283

Mirzaa GM. et al.
Characterisation of mutations of the phosphoinositide-3-kinase regulatory subunit, PIK3R2, in perisylvian polymicrogyria: a next-generation sequencing study
Lancet Neurol. 2015, 14 (12): p. 1182-1195
doi: 10.1016/S1474-4422(15)00278

Dumas P. et al.
Spodoptera frugiperda (Lepidoptera : Noctuidae) host-plant variants : two host strains or two distinct species ?
Genetica. 2015, 143(3):305-316

esur I. et al.
The oak gene expression atlas : insights into Fagaceae genome evolution and the discovery of genes regulated during bud dormancy release
Bmc Genomics. 2015, 16:112

Sunagawa S. et al.
Tara Oceans C,Structure and function of the global ocean microbiome
Science. 2015 348(6237):1261359

Audo R. et al.
Identification of genes regulating TRAIL-induced apoptosis in rheumatoid arthritis fibroblasts-like synoviocytes
Genes Immun. 2015 16:462-9

Manfrini N. et al.
RNA-processing proteins regulate Mec1/ATR activation by promoting generation of RPA-coated ssDNA
EMBO Rep. 2015

Thierry A. et al.
Macrotene chromosomes provide insights to a new mechanism of high-order gene amplification in eukaryotes
Nat Commun.2015 Jan 30;6:6154

Biryukova I. et al.
Endogenous siRNAs and piRNAs derived from transposable elements and genes in the malaria vector mosquito Anopheles gambiae
BMC Genomics. 2015 Apr 10;16:278

Kocher A. et al.
Complete mitochondrial genome of Lutzomyia (Nyssomyia) umbratilis (Diptera: Psychodidae), the main vector of Leishmania guyanensis
Mitochondrial DNA. 2015 May 22:1-3

Sacco E. et al.
Mutation landscape of acquired cross-resistance to glycopeptide and ?-lactam antibiotics in Enterococcus faecium
Antimicrob Agents Chemother.2015 Sep;59(9):5306-15

Portal MM. et al.
TARDIS, a targeted RNA directional sequencing method for rare RNA discovery
Nat Protoc. 2015 Dec;10(12):1915-38

Esquer-Garrigos Y. et al.
Detecting natural hybridization between two vulnerable Andean pupfishes (Orestias agassizii and O-luteus) representative of the Altiplano endemic fisheries
Conservation Genetics. 2015, 16(3):717-727

Lima-Mendez G. et al.
Determinants of community structure in the global plankton interactome
Science 2015, 348(6237):1262073

Terrat S. et al.
Improving soil bacterial taxa-area relationships assessment using DNA meta-barcoding
Heredity. 2015, 114(5):468-475

Bertrand B. et al.
The greater phenotypic homeostasis of the allopolyploid Coffea arabica improved the transcriptional homeostasis over that of both diploid parents
Plant Cell Physiol. 2015 56:2035-51

Libertini E. et al.
Overexpression of the Heterochromatinization Factor BAHD1 in HEK293 Cells Differentially Reshapes the DNA Methylome on Autosomes and X Chromosome
Front Genet. 2015 1;6:339

Cottrez F. et al.
SENS-IS, a 3D reconstituted epidermis based model for quantifying chemical sensitizationpotency: Reproducibility and predictivity results from an inter-laboratory study
Toxicol In Vitro.. 2016 Jan 18;32:248-260

Bouvet P. et al.
Foot infection by Clostridium sordellii: case report and review of 15 cases in France
J Clin Microbiol. 2015 Apr;53(4):1423-7

Brum JR. et al.
Tara Oceans C,Patterns and ecological drivers of ocean viral communities
Science. 2015 348(6237):1261498.1261491-1261498.1261410.
doi: 10.1126/science.aah6502

Chevalier B. et al.
miR-34/449 control apical actin network formation during multiciliogenesis through small GTPase pathways
Nat Commun.2015 Sep 18;6:8386

Siudeja K. et al.
Frequent Somatic Mutation in Adult Intestinal StemCells Drives Neoplasia and Genetic Mosaicism during Aging
Cell Stem Cell.
doi: 10.1016/j.stem.2015.09.016

Farasin J. et al.
Thiomonas sp CB2 is able to degrade urea and promote toxic metal precipitation in acid mine drainage waters supplemented with urea
Frontiers in Microbiology. 2015, 6:993

Loux V. et al.
Mutations and genomic islands can explain the strain dependency of sugar utilization in 21 strains of Propionibacterium freudenreichii
Bmc Genomics. 2015 16(1):296

Veron G. et al.
Systematics of the Southeast Asian mongooses (Herpestidae, Carnivora) : solving the mystery of the elusive collared mongoose and Palawan mongoose
Zoological Journal of the Linnean Society 2015, 173(1):236-248

Roquis D. et al.
The epigenome of Schistosoma mansoni provides insight about how Cercariae poise transcription until infection
PLoS Negl Trop Dis. 2015 9:e0003853

Balloy V. et al.
Normal and Cystic Fibrosis Human Bronchial Epithelial Cells Infected with Pseudomonas aeruginosa Exhibit Distinct Gene Activation Patterns
PLoS One. 2015 10(10):e014097

Boulay AC. et al.
The Sarcoglycan complex is expressed in the cerebrovascular system and is specifically regulated by astroglial Cx30 channels
Front Cell Neurosci. 2015 Feb 2;9:9