Publications 2015

Sanulli S. et al.
Jarid2 Methylation via the PRC2 Complex Regulates H3K27me3 Deposition during Cell Differentiation
Mol. Cell.
doi: 10.1016/j.molcel.2014.12.020

Chen H. et al.
Reinforcement of STAT3 activity reprogrammes human embryonic stem cells to naive-like pluripotency
Nat Commun. 2015 May 13;6:7095
doi:

Gresset A. et al.
Boundary Caps Give Rise to Neurogenic Stem Cells and Terminal Glia in the Skin
Stem Cell Reports.. 2015 Aug 11;5(2):278-90
doi:

Tourneau, C.L et al.
Molecularly targeted therapy based on tumour molecular profiling versus conventional therapy for advanced cancer (SHIVA): a multicentre, open-label, proof-of-concept, randomised, controlled phase 2 trial
Lancet Oncol.
doi: 10.1016/S1470-2045(15)00188-6

Chevignon G. et al.
Transcriptomic response of Manduca sexta immune tissues to parasitization by the bracovirus associated wasp Cotesia congregata
Insect Biochemistry and Molecular Biology. 2015, 62:86-99
doi:

Hespeels B. et al.
Against All Odds : Trehalose-6-Phosphate Synthase and Trehalase Genes in the Bdelloid Rotifer Adineta vaga Were Acquired by Horizontal Gene Transfer and Are Upregulated during Desiccation
PLoS One. 2015, 10(7) :e0131313
doi:

Pingault L. et al.
Deep transcriptome sequencing provides new insights into the structural and functional organization of the wheat genome
Genome Biology 2015, 16:29
doi:

Bai Q et al.
Temporal analysis of genome alterations induced by single-cell passaging in human embryonic stem cells
Stem Cells Dev. 2015 24:653-62
doi:

Madic J. et al.
Circulating tumor DNA and circulating tumor cells in metastatic triple negative breast cancer patients
Int. J. Cancer. 2015
doi:

Mazuet C. et al.
Draft Genome Sequence of Clostridium botulinum Strain 277-00 Type B2
Genome Announc.2015 Apr 2;3(2). pii: e00211-15
doi:

Bork P. et al.
Tara Oceans studies plankton at PLANETARY SCALE
Science.2015 348(6237):873-873.
doi: 10.1126/science.aac5605

Eleveld, T.F. et al.
Relapsed neuroblastomas show frequent RAS-MAPK pathway mutations
Nature Genetics.
doi: 10.1038/ng.3333

Ravens S. et al.
Tip60 complex binds to active Pol II promoters and a subset of enhancers and co-regulates the c-Myc network in mouse embryonic stem cells
Epigenetics Chromatin. 2015 Nov 6;8:45.
doi: 10.1186/s13072-015-0039-z

Clerissi C. et al.
Deep sequencing of amplified Prasinovirus and host green algal genes from an Indian Ocean transect reveals interacting trophic dependencies and new genotypes
Environmental Microbiology Reports. 2015, 7(6):979-989
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Jacquet F. et al.
Phylogeography and evolutionary history of the Crocidura olivieri complex (Mammalia, Soricomorpha) : from a forest origin to broad ecological expansion across Africa
Bmc Evolutionary Biology. 2015, 15:71
doi:

Plomion C. et al.
Decoding the oak genome : public release of sequence data, assembly, annotation and publication strategies
Molecular Ecology Resources 2015
doi:

Delaby Cet al.
Central Nervous System and Peripheral Inflammatory Processes in Alzheimer's Disease: Biomarker Profiling Approach
Front Neurol. 2015 6:181
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Grünewald, T.G.P. et al.
Chimeric EWSR1-FLI1 regulates the Ewing sarcoma susceptibility gene EGR2 via a GGAA microsatellite
Nature Genetics. 2015
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Ghassemi S. et al.
The ß-importin KAP8 (Pse1/Kap121) is required for nuclear import of the cellulase transcriptional regulator XYR1, asexual sporulation and stress resistance in Trichoderma reesei
Mol Microbiol. 2015 Apr;96(2):405-18
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Murienne J. et al.
PCR-free shotgun sequencing of the stone loach mitochondrial genome (Barbatula barbatula)
Mitochondrial DNA. 2015 May 22:1-2
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Brahimi-Horn MC. et al.
Knockout of Vdac1activates hypoxia-inducible factor through reactive oxygen species generation andinduces tumor growth by promoting metabolic reprogramming and inflammation
Cancer Metab. 2015 Aug 26;3:8
doi:

Oravecz A. et al.
Ikaros mediates gene silencing in T cells through Polycomb repressive complex 2
Nat Commun. 2015 Nov 9;6:8823
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Czernic P. et al.
Convergent Evolution of Endosymbiont Differentiation in Dalbergioid and Inverted Repeat-Lacking Clade Legumes Mediated by Nodule-Specific Cysteine-Rich Peptides
Plant physiology. 2015, 169(2):1254-1265
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Kopylova E. et al.
Deciphering metatranscriptomic data
Methods in molecular biology. (Clifton, NJ), 2015, 1269:279-291
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Rollat-Farnier PA. et al.
Two Host Clades, Two Bacterial Arsenals : Evolution through Gene Losses in Facultative Endosymbionts
Genome Biology and Evolution. 2015, 7(3):839-855
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Ozmadenci D. et al.
Netrin-1 regulates somatic cell reprogramming and pluripotency maintenance
Nat Commun. 2015 6:7398
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Bellini A. et al.
Deep sequencing reveals occurrence of sub-clonal ALK mutations in neuroblastoma at diagnosis
Clin. Cancer Res. 2015
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Madoui MA. et al.
Genome assembly using Nanopore-guided long and error-free DNA reads
Bmc Genomics,. 2015, 16:327.
doi: 10.1186/s12864-015-1519-z

Seubert B. et al.
Tetraspanin CD63 acts as a pro-metastaticfactor via ?-catenin stabilization
Int J Cancer. 2015 May 15;136(10):2304-15
doi: 10.1002/ijc.29296

Boussaha M. et al.
Genome-Wide Study of Structural Variants in Bovine Holstein, Montbéliarde and Normande Dairy Breeds
PLoS One.. 2015 Aug 28;10(8):e0135931
doi: