Bioinformatics

Nils Giordano et al.
Genome-scale community modelling reveals conserved metabolic cross-feedings in epipelagic bacterioplankton communities
Nature Communications 2024, vol. 15, issue 1
doi: 10.1038/s41467-024-46374-w

Téo Lemane et al.
Indexing and real-time user-friendly queries in terabyte-sized complex genomic datasets with kmindex and ORA
Nature Computational Science 2024, vol. 4, issue 2
doi: 10.1038/s43588-024-00596-6

Roy El Hourany et al.
Linking satellites to genes with machine learning to estimate phytoplankton community structure from space
Ocean Science 2024, vol. 20, issue 1
doi: 10.5194/os-20-217-2024

Céline Loot et al.
Integron cassettes integrate into bacterial genomes via widespread non-classical attG sites
Nature Microbiology 2024, vol. 9, issue 1
doi: 10.1038/s41564-023-01548-y

Sofia Rigou et al.
Pithoviruses Are Invaded by Repeats That Contribute to Their Evolution and Divergence from Cedratviruses
Molecular Biology and Evolution 2023, vol. 40, issue 11
doi: 10.1093/molbev/msad244

Hiroto Kaneko et al.
Predicting global distributions of eukaryotic plankton communities from satellite data
ISME Communications 2023, vol. 3, issue 1
doi: 10.1038/s43705-023-00308-7

Angelina Beavogui et al.
The defensome of complex bacterial communities
2023
doi: 10.1101/2023.08.12.553040

Thomas Cokelaer et al.
Reprohackathons: promoting reproducibility in bioinformatics through training
Bioinformatics 2023, vol. 39, issue Supplement_1
doi: 10.1093/bioinformatics/btad227

Lisa Sikkema et al.
An integrated cell atlas of the lung in health and disease
Nature Medicine 2023, vol. 29, issue 6
doi: 10.1038/s41591-023-02327-2

Guillaume Martin et al.
Shared pedigree relationships and transmission of unreduced gametes in cultivated banana
Annals of Botany 2023
doi: 10.1093/aob/mcad065