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  1. Technological expertises

Technological expertises

A comprehensive catalogue of state-of-the-art techniques

The operational team of each FRANCE GENOMIQUE platform is involved in the implementation of new protocols or bioinformatics tools and thus allows the infrastructure to offer its collaborators a wide range of cutting-edge techniques in the various fields of sequencing application.

Rubriques associées

  • The catalog of expertise for the France Génomique network
  • Whole Genome
  • Targeted genome
  • Regulome
  • Transcriptome
  • Metagenomics
  • Spatial transcriptomics
  • Single Cell
  • Genotyping (DNA, RNA, CpG arrays)

Our equipment

Our platforms

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  • Technological expertises
    • The catalog of expertise
    • Whole Genome
      • « Short read » sequencing through « clustering »
      • « Short read » sequencing by DNB
      • « Mate Pair » Sequencing
      • « Long Read » Sequencing
      • « Long Reads ONT » Sequencing
      • « Synthetic Long Read » Sequencing
      • Optical Mapping
      • Tn-Seq
      • Omni-C
      • Pore-C
    • Targeted genome
      • AmpliSeq (targeted regions, exome, SSRs)
      • RAD seq
      • Adaptive sampling
    • Transcriptome
      • Ribo-Seq
    • Spatial transcriptomics
      • Transcriptome-wide or NGS-based approaches
      • Targeted spatial omics methods using RNA probes
  • Technological expertises (continue)
    • Regulome
      • Small RNA Sequencing
      • TSS seq
      • ATAC seq
      • FAIRE seq
      • MNase seq
      • DNase seq
      • 3C, 4C and 5C-seq
      • HiC-seq
      • CHIP seq
      • CLIP seq
      • CUT & RUN vs CUT & Tag
      • MeDIP
      • BiSeq
      • Methyl seq
      • EM-seq
      • TAPS/TAPSβ
      • Methylation of native DNA and RNA
    • Metagenomics
      • Metagenomics using targeted amplicon/ barcoding/metabarcoding
      • Shotgun metagenomics
    • Single Cell
      • scDNA-seq
      • scRNAseq
      • ScNaUmi-seq
    • Genotyping (DNA, RNA, CpG arrays)
  • Bioinformatics tools
    • Data managment and processing
      • EOULSAN
      • AOZAN
      • ToulligQC
      • AsaruSim
    • Data analysis
      • seqMINER
      • BioConvert
  • Databases
    • FREX : THE FRENCH EXOME PROJECT DATABASE
    • OGA V2.0 : Ocean Gene Atlas v2.0
  • Technological watch
France Génomique

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91 057 Evry Cedex

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