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Infrastructure
France Génomique
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Platforms and equipment
The platforms
The equipments
e-infrastructure
Expertise
Technological expertises
The catalog of expertise
Whole Genome
« Short read » sequencing through « clustering »
« Short read » sequencing by DNB
« Long Read » Sequencing
« Long Reads ONT » Sequencing
Optical Mapping
Tn-Seq
Omni-C
Pore-C
Targeted genome
AmpliSeq (targeted regions, exome, SSRs)
RAD seq
Adaptive sampling
Transcriptome
RNA-seq
Ribo-Seq
Metatranscriptomics
Spatial transcriptomics
Transcriptome-wide or NGS-based approaches
Targeted spatial omics methods using RNA probes
Expertises 2
Regulome
Small RNA Sequencing
TSS seq
ATAC seq
MNase seq
HiC-seq
CHIP seq
CLIP seq
CUT & RUN vs CUT & Tag
MeDIP
BiSeq
Methyl seq
EM-seq
TAPS/TAPSβ
Methylation of native DNA and RNA
Expertises 3
Metagenomics
Metagenomics using targeted amplicon/ barcoding/metabarcoding
Shotgun metagenomics
Single Cell
scDNA-seq
scRNAseq
ScNaUmi-seq
Genotyping (DNA, RNA, CpG arrays)
Bioinformatics tools
Data managment and processing
EOULSAN
AOZAN
ToulligQC
AsaruSim
Data analysis
seqMINER
BioConvert
Databases
FREX : THE FRENCH EXOME PROJECT DATABASE
OGA V2.0 : Ocean Gene Atlas v2.0
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