Metabarcoding

Miriam I. Brandt et al.
Evaluating sediment and water sampling methods for the estimation of deep-sea biodiversity using environmental DNA
Scientific Reports 2021, vol. 11, issue 1
doi: 10.1038/s41598-021-86396-8

Miriam I. Brandt et al.
Bioinformatic pipelines combining denoising and clustering tools allow for more comprehensive prokaryotic and eukaryotic metabarcoding
Molecular Ecology Resources 2021
doi: 10.1111/1755-0998.13398

Christophe Djemiel et al.
BIOCOM-PIPE: a new user-friendly metabarcoding pipeline for the characterization of microbial diversity from 16S, 18S and 23S rRNA gene amplicons
BMC Bioinformatics 2020, vol. 21, issue 1
doi: 10.1186/s12859-020-03829-3

Shinichi Sunagawa et al.
Tara Oceans: towards global ocean ecosystems biology
Nature Reviews Microbiology 2020, vol. 18, issue 8
doi: 10.1038/s41579-020-0364-5

Miriam I. Brandt et al.
An Assessment of Environmental Metabarcoding Protocols Aiming at Favoring Contemporary Biodiversity in Inventories of Deep-Sea Communities
Frontiers in Marine Science 2020, vol. 7
doi: 10.3389/fmars.2020.00234

Inger Greve Alsos et al.
The Treasure Vault Can be Opened: Large-Scale Genome Skimming Works Well Using Herbarium and Silica Gel Dried Material
Plants 2020, vol. 9, issue 4
doi: 10.3390/plants9040432

Olivier Zemb et al.
Absolute quantitation of microbes using 16S rRNA gene metabarcoding: A rapid normalization of relative abundances by quantitative PCR targeting a 16S rRNA gene spike‐in standard
MicrobiologyOpen 2020, vol. 9, issue 3
doi: 10.1002/mbo3.977

Gabriel Gorsky et al.
Expanding Tara Oceans Protocols for Underway, Ecosystemic Sampling of the Ocean-Atmosphere Interface During Tara Pacific Expedition (2016–2018)
Frontiers in Marine Science 2019, vol. 6
doi: 10.3389/fmars.2019.00750

Emile Faure et al.
Mixotrophic protists display contrasted biogeographies in the global ocean
The ISME Journal 2019, vol. 13, issue 4
doi: 10.1038/s41396-018-0340-5