Metabarcoding

Damien Rei et al.
Age-associated gut microbiota impair hippocampus-dependent memory in a vagus-dependent manner
JCI Insight 2022, vol. 7, issue 15
doi: 10.1172/jci.insight.147700

Frédérique Changey et al.
Catching change in microbial diversity indicators under different soil organic matter managements: Higher taxonomic resolution, better discrimination?
Ecological Indicators 2022, vol. 139
doi: 10.1016/j.ecolind.2022.108897

Tristan Cordier et al.
Patterns of eukaryotic diversity from the surface to the deep-ocean sediment
Science Advances 2022, vol. 8, issue 5
doi: 10.1126/sciadv.abj9309

Juan José Pierella Karlusich et al.
A robust approach to estimate relative phytoplankton cell abundances from metagenomes
Molecular Ecology Resources 2022
doi: 10.1111/1755-0998.13592

Blandine Trouche et al.
Diversity and Biogeography of Bathyal and Abyssal Seafloor Bacteria and Archaea Along a Mediterranean—Atlantic Gradient
Frontiers in Microbiology 2021, vol. 12
doi: 10.3389/fmicb.2021.702016

Clemens Schauberger et al.
Microbial community structure in hadal sediments: high similarity along trench axes and strong changes along redox gradients
The ISME Journal 2021
doi: 10.1038/s41396-021-01021-w

Miriam I. Brandt et al.
Evaluating sediment and water sampling methods for the estimation of deep-sea biodiversity using environmental DNA
Scientific Reports 2021, vol. 11, issue 1
doi: 10.1038/s41598-021-86396-8

Miriam I. Brandt et al.
Bioinformatic pipelines combining denoising and clustering tools allow for more comprehensive prokaryotic and eukaryotic metabarcoding
Molecular Ecology Resources 2021
doi: 10.1111/1755-0998.13398

Pierre-Yves Pascal et al.
Feeding in spatangoids: the case of Abatus Cordatus in the Kerguelen Islands (Southern Ocean)
Polar Biology 2021, vol. 44, issue 4
doi: 10.1007/s00300-021-02841-4

Christophe Djemiel et al.
BIOCOM-PIPE: a new user-friendly metabarcoding pipeline for the characterization of microbial diversity from 16S, 18S and 23S rRNA gene amplicons
BMC Bioinformatics 2020, vol. 21, issue 1
doi: 10.1186/s12859-020-03829-3