Publications 2021

Aimeric Bruno et al.
BoardION: real-time monitoring of Oxford Nanopore sequencing instruments
BMC Bioinformatics 2021, vol. 22, issue 1
doi: 10.1186/s12859-021-04161-0

M. Guichard et al.
Identification of quantitative trait loci associated with calmness and gentleness in honey bees using whole‐genome sequences
Animal Genetics 2021
doi: 10.1111/age.13070

Jean-Noël Hubert et al.
The PI3K/mTOR Pathway Is Targeted by Rare Germline Variants in Patients with Both Melanoma and Renal Cell Carcinoma
Cancers 2021, vol. 13, issue 9
doi: 10.3390/cancers13092243

Joep Joosten et al.
PIWI proteomics identifies Atari and Pasilla as piRNA biogenesis factors in Aedes mosquitoes
Cell Reports 2021, vol. 35, issue 5
doi: 10.1016/j.celrep.2021.109073

Chiara Bernardi et al.
CD4+ T cells require Ikaros to inhibit their differentiation toward a pathogenic cell fate
Proceedings of the National Academy of Sciences 2021, vol. 118, issue 17
doi: 10.1073/pnas.2023172118

Patrick Ollitrault et al.
Segregation Distortion for Male Parents in High Density Genetic Maps from Reciprocal Crosses between Two Self-Incompatible Cultivars Confirms a Gametophytic System for Self-Incompatibility in Citrus
Agriculture 2021, vol. 11, issue 5
doi: 10.3390/agriculture11050379

Romain Daveu et al.
Sequence diversity and evolution of a group of iflaviruses associated with ticks
Archives of Virology 2021
doi: 10.1007/s00705-021-05060-8

Jeremy Choin et al.
Genomic insights into population history and biological adaptation in Oceania
Nature 2021, vol. 592, issue 7855
doi: 10.1038/s41586-021-03236-5

Miriam I. Brandt et al.
Evaluating sediment and water sampling methods for the estimation of deep-sea biodiversity using environmental DNA
Scientific Reports 2021, vol. 11, issue 1
doi: 10.1038/s41598-021-86396-8

Miriam I. Brandt et al.
Bioinformatic pipelines combining denoising and clustering tools allow for more comprehensive prokaryotic and eukaryotic metabarcoding
Molecular Ecology Resources 2021
doi: 10.1111/1755-0998.13398

Melina Kerou et al.
Genomes of Thaumarchaeota from deep sea sediments reveal specific adaptations of three independently evolved lineages
The ISME Journal 2021
doi: 10.1038/s41396-021-00962-6

Daniel Jeffery et al.
CENP-A overexpression promotes distinct fates in human cells, depending on p53 status
Communications Biology 2021, vol. 4, issue 1
doi: 10.1038/s42003-021-01941-5

Elise J. Gay et al.
Large-scale transcriptomics to dissect 2 years of the life of a fungal phytopathogen interacting with its host plant
BMC Biology 2021, vol. 19, issue 1
doi: 10.1186/s12915-021-00989-3

Sébastien Coassolo et al.
Citrullination of pyruvate kinase M2 by PADI1 and PADI3 regulates glycolysis and cancer cell proliferation
Nature Communications 2021, vol. 12, issue 1
doi: 10.1038/s41467-021-21960-4

Sébastien Relier et al.
FTO-mediated cytoplasmic m6Am demethylation adjusts stem-like properties in colorectal cancer cell
Nature Communications 2021, vol. 12, issue 1
doi: 10.1038/s41467-021-21758-4

Fang Wang et al.
Histone H2Bub1 deubiquitylation is essential for mouse development, but does not regulate global RNA polymerase II transcription
Cell Death & Differentiation 2021
doi: 10.1038/s41418-021-00759-2

Céline Callens et al.
Molecular features of untreated breast cancer and initial metastatic event inform clinical decision-making and predict outcome: long-term results of ESOPE, a single-arm prospective multicenter study
Genome Medicine 2021, vol. 13, issue 1
doi: 10.1186/s13073-021-00862-6

Christoph Muus et al.
Single-cell meta-analysis of SARS-CoV-2 entry genes across tissues and demographics
Nature Medicine 2021, vol. 27, issue 3
doi: 10.1038/s41591-020-01227-z

Katarzyna Siudeja et al.
Unraveling the features of somatic transposition in the Drosophila intestine
The EMBO Journal 2021
doi: 10.15252/embj.2020106388

Pierre Boudry et al.
Identification of RNAs bound by Hfq reveals widespread RNA partners and a sporulation regulator in the human pathogen Clostridioides difficile
RNA Biology 2021
doi: 10.1080/15476286.2021.1882180

Nicolas Huot et al.
SIV-induced terminally differentiated adaptive NK cells in lymph nodes associated with enhanced MHC-E restricted activity
Nature Communications 2021, vol. 12, issue 1
doi: 10.1038/s41467-021-21402-1

Elena Gargaun et al.
The lncRNA 44s2 Study Applicability to the Design of 45-55 Exon Skipping Therapeutic Strategy for DMD
Biomedicines 2021, vol. 9, issue 2
doi: 10.3390/biomedicines9020219

Romain Feron et al.
RADSex: A computational workflow to study sex determination using restriction site‐associated DNA sequencing data
Molecular Ecology Resources 2021
doi: 10.1111/1755-0998.13360

Annela Semai et al.
Characterisation of hydrocarbon degradation, biosurfactant production, and biofilm formation in Serratia sp. Tan611: a new strain isolated from industrially contaminated environment in Algeria
Antonie van Leeuwenhoek 2021, vol. 114, issue 4
doi: 10.1007/s10482-021-01527-5

Madoka Vera Krick et al.
Family-effects in the epigenomic response of red blood cells to a challenge test in the European sea bass (Dicentrarchus labrax, L.)
BMC Genomics 2021, vol. 22, issue 1
doi: 10.1186/s12864-021-07420-9

Tracy Rabilloud et al.
Single-cell profiling identifies pre-existing CD19-negative subclones in a B-ALL patient with CD19-negative relapse after CAR-T therapy
Nature Communications 2021, vol. 12, issue 1
doi: 10.1038/s41467-021-21168-6

Mickael Orgeur et al.
Pathogenomic analyses of Mycobacterium microti, an ESX-1-deleted member of the Mycobacterium tuberculosis complex causing disease in various hosts
Microbial Genomics 2021, vol. 7, issue 2
doi: 10.1099/mgen.0.000505

Paul Gueguen et al.
Contribution of resident and circulating precursors to tumor-infiltrating CD8+ T cell populations in lung cancer
Science Immunology 2021, vol. 6, issue 55
doi: 10.1126/sciimmunol.abd5778

Lara Zorro Shahidian et al.
Succinylation of H3K122 destabilizes nucleosomes and enhances transcription
EMBO reports 2021, vol. 22, issue 3
doi: 10.15252/embr.202051009

Qiaowei Pan et al.
The rise and fall of the ancient northern pike master sex-determining gene
eLife 2021, vol. 10
doi: 10.7554/elife.62858