Publications 2023

Sarah Temmam et al.
SARS‐CoV‐2‐related bat virus behavior in human‐relevant models sheds light on the origin of COVID‐19
EMBO reports 2023
doi: 10.15252/embr.202256055

Florence Blot et al.
Gut Microbiota Remodeling and Intestinal Adaptation to Lipid Malabsorption After Enteroendocrine Cell Loss in Adult Mice
Cellular and Molecular Gastroenterology and Hepatology 2023, vol. 15, issue 6
doi: 10.1016/j.jcmgh.2023.02.013

Hugo Doré et al.
Differential global distribution of marine picocyanobacteria gene clusters reveals distinct niche-related adaptive strategies
The ISME Journal 2023
doi: 10.1038/s41396-023-01386-0

Kevin Lebrigand et al.
The spatial landscape of gene expression isoforms in tissue sections
Nucleic Acids Research 2023
doi: 10.1093/nar/gkad169

Nadia Jeremiah et al.
RELA tunes innate-like interferon I/III responses in human T cells
Journal of Experimental Medicine 2023, vol. 220, issue 5
doi: 10.1084/jem.20220666

et al.
“Spatial transcriptomics for respiratory research and medicine.” S. Curras-Alonso, J. Soulier, T. Walter,et al.Eur Respir J2021; 58: 2004314
European Respiratory Journal 2023, vol. 61, issue 2
doi: 10.1183/13993003.54314-2020

Gregoire Le Provost et al.
Oak stands along an elevation gradient have different molecular strategies for regulating bud phenology
BMC Plant Biology 2023, vol. 23, issue 1
doi: 10.1186/s12870-023-04069-2

Lise Folon et al.
Contribution of heterozygous PCSK1 variants to obesity and implications for precision medicine: a case-control study
The Lancet Diabetes & Endocrinology 2023, vol. 11, issue 3
doi: 10.1016/s2213-8587(22)00392-8

Dmitrii Y. Travin et al.
Dual-Uptake Mode of the Antibiotic Phazolicin Prevents Resistance Acquisition by Gram-Negative Bacteria
mBio 2023
doi: 10.1128/mbio.00217-23

Tranchant-Dubreuil Christine et al.
FrangiPANe, a tool for creating a panreference using left behind reads
NAR Genomics and Bioinformatics 2023, vol. 5, issue 1
doi: 10.1093/nargab/lqad013

Hala Al Adhami et al.
Systematic identification of factors involved in the silencing of germline genes in mouse embryonic stem cells
Nucleic Acids Research 2023, vol. 51, issue 7
doi: 10.1093/nar/gkad071

Hala Al Adhami et al.
Systematic identification of factors involved in the silencing of germline genes in mouse embryonic stem cells
Nucleic Acids Research 2023
doi: 10.1093/nar/gkad071

Xuexue Liu et al.
DNA methylation-based profiling of horse archaeological remains for age-at-death and castration
iScience 2023, vol. 26, issue 3
doi: 10.1016/j.isci.2023.106144

Antonela Merlotti et al.
Noncanonical splicing junctions between exons and transposable elements represent a source of immunogenic recurrent neo-antigens in patients with lung cancer
Science Immunology 2023, vol. 8, issue 80
doi: 10.1126/sciimmunol.abm6359

Marianne Burbage et al.
Epigenetically controlled tumor antigens derived from splice junctions between exons and transposable elements
Science Immunology 2023, vol. 8, issue 80
doi: 10.1126/sciimmunol.abm6360

Emmanuel E. Adade et al.
Gnotobiotic zebrafish microbiota display inter-individual variability affecting host physiology
2023
doi: 10.1101/2023.02.01.526612

Alexis Dereeper et al.
Naegleria genus pangenome reveals new structural and functional insights into the versatility of these free-living amoebae
Frontiers in Microbiology 2023, vol. 13
doi: 10.3389/fmicb.2022.1056418

Alexis Dereeper et al.
Naegleria genus pangenome reveals new structural and functional insights into the versatility of these free-living amoebae
Frontiers in Microbiology 2023, vol. 13
doi: 10.3389/fmicb.2022.1056418

Mira Brazane et al.
The ribose methylation enzyme FTSJ1 has a conserved role in neuron morphology and learning performance
Life Science Alliance 2023, vol. 6, issue 4
doi: 10.26508/lsa.202201877

Ngoc-Khanh Nguyen et al.
A cluster of broadly neutralizing IgG against BK polyomavirus in a repertoire dominated by IgM
Life Science Alliance 2023, vol. 6, issue 4
doi: 10.26508/lsa.202201567

Enora Dupas et al.
Suspicions of two bridgehead invasions of Xylella fastidiosa subsp. multiplex in France
Communications Biology 2023, vol. 6, issue 1
doi: 10.1038/s42003-023-04499-6

Michel Boisseau et al.
Species interactions, stability, and resilience of the gut microbiota - Helminth assemblage in horses
iScience 2023, vol. 26, issue 2
doi: 10.1016/j.isci.2023.106044

Jacqueline Fontugne et al.
Progression‐associated molecular changes in basal/squamous and sarcomatoid bladder carcinogenesis
The Journal of Pathology 2023, vol. 259, issue 4
doi: 10.1002/path.6060

Damien Gayrard et al.
Genome Sequence of the Streptomyces Strain AgN23 Revealed Expansion and Acquisition of Gene Repertoires Potentially Involved in Biocontrol Activity and Rhizosphere Colonization
PhytoFrontiers™ 2023
doi: 10.1094/phytofr-11-22-0131-r

Stéphane L'Haridon et al.
Methanocaldococcus lauensis sp. nov., a novel deep-sea hydrothermal vent hyperthermophilic methanogen
International Journal of Systematic and Evolutionary Microbiology 2023, vol. 73, issue 1
doi: 10.1099/ijsem.0.005646

Colin Clairet et al.
Nucleosome patterns in four plant pathogenic fungi with contrasted genome structures
Peer Community Journal 2023, vol. 3
doi: 10.24072/pcjournal.227

Mandy L. Ballinger et al.
Heritable defects in telomere and mitotic function selectively predispose to sarcomas
Science 2023, vol. 379, issue 6629
doi: 10.1126/science.abj4784

Lucía Ramos-Alonso et al.
Mitotic chromosome condensation resets chromatin to safeguard transcriptional homeostasis during interphase
Proceedings of the National Academy of Sciences 2023, vol. 120, issue 4
doi: 10.1073/pnas.2210593120

Akos Gyenis et al.
Genome-wide RNA polymerase stalling shapes the transcriptome during aging
Nature Genetics 2023, vol. 55, issue 2
doi: 10.1038/s41588-022-01279-6

Julien Broséus et al.
Molecular characterization of Richter syndrome identifies de novo diffuse large B-cell lymphomas with poor prognosis
Nature Communications 2023, vol. 14, issue 1
doi: 10.1038/s41467-022-34642-6