Publications 2018

Wery M et al.
Native elongating transcript sequencing reveals global anti-correlation between sense and antisense nascent transcription in fission yeast
RNA 2017 24(2)
doi: 10.1261/rna.063446.117

Bonaventure A et al.
Genetic polymorphisms of Th2 interleukins, history of asthma or eczema and childhood acute lymphoid leukaemia: Findings from the ESCALE study (SFCE)
Cancer Epidemiology 2018
doi: 10.1016/j.canep.2018.05.004

Girard E et al.
Familial breast cancer and DNA repair genes: Insights into known and novel susceptibility genes from the GENESIS study, and implications for multigene panel testing
International Journal of Cancer 2018 144(8)
doi: 10.1002/ijc.31921

Pierron D et al.
Strong selection during the last millennium for African ancestry in the admixed population of Madagascar
Nature Communications 2018 9(1)
doi: 10.1038/s41467-018-03342-5

Yauy K et al.
B3GAT3-related disorder with craniosynostosis and bone fragility due to a unique mutation
Genetics in Medicine 2017 20(2)
doi: 10.1038/gim.2017.109

Garneau JR et al.
High Prevalence and Genetic Diversity of Large phiCD211 (phiCDIF1296T)-Like Prophages in Clostridioides difficile
Applied and Environmental Microbiology 2017 84(3)
doi: 10.1128/AEM.02164-17

Moné Y et al.
Characterization and expression profiling of microRNAs in response to plant feeding in two host-plant strains of the lepidopteran pest Spodoptera frugiperda
BMC Genomics 2018 19(1
doi: 10.1186/s12864-018-5119-6

Mollion M et al.
Patterns of Genome-Wide Nucleotide Diversity in the Gynodioecious Plant Thymus vulgaris Are Compatible with Recent Sweeps of Cytoplasmic Genes
Genome Biology and Evolution 2017 10(1)
doi: 10.1093/gbe/evx272

Piredda R et al.
Diatom diversity through HTS-metabarcoding in coastal European seas
Scientific Reports 2018 8(1)
doi: 10.1038/s41598-018-36345-9

Monteil CL et al.
Genomic study of a novel magnetotactic
Alphaproteobacteria
uncovers the multiple ancestry of magnetotaxis
Environmental Microbiology 2018 20(12)
doi: 10.1111/1462-2920.14364

Gschloessl B et al.
De novo genome and transcriptome resources of the Adzuki bean borer Ostrinia scapulalis (Lepidoptera: Crambidae)
Data in Brief 2018 17
doi: 10.1016/j.dib.2018.01.073

Bigot D et al.
Discovery of Culex pipiens associated tunisia virus: a new ssRNA(+) virus representing a new insect associated virus family
Virus Evolution 2018 4(1)
doi: 10.1093/ve/vex040

Delord C et al.
A cost-and-time effective procedure to develop SNP markers for multiple species: A support for community genetics
Methods in Ecology and Evolution 2018 9(9)
doi: 10.1111/2041-210X.13034

Bartoli C et al.
In situ relationships between microbiota and potential pathobiota in Arabidopsis thaliana
The ISME Journal 2018 12(8)
doi: 10.1038/s41396-018-0152-7

Choque E et al.
Whole-genome sequencing of Aspergillus tubingensis G131 and overview of its secondary metabolism potential
BMC Genomics 2018 19(1)
doi: 10.1186/s12864-018-4574-4

Flegontova O et al.
Neobodonids are dominant kinetoplastids in the global ocean
Environmental Microbiology 2018 20(2)
doi: 10.1111/1462-2920.14034

Sugier K et al.
Chitin distribution in the Oithona digestive and reproductive systems revealed by fluorescence microscopy
PeerJ 2018 6
doi: 10.7717/peerj.4685

Revinski DR et al.
CDC20B is required for deuterosome-mediated centriole production in multiciliated cells
Nature Communications 2018 9(1)
doi: 10.1038/s41467-018-06768-z

Jiménez I et al.
Circulating tumor DNA analysis enables molecular characterization of pediatric renal tumors at diagnosis
International Journal of Cancer 2018 144(1)
doi: 10.1002/ijc.31620

Ben Youssef G et al.
Ontogeny of human mucosal-associated invariant T cells and related T cell subsets
The Journal of Experimental Medicine 2018 215(2)
doi: 10.1084/jem.20171739

Bonnet E et al.
Performance comparison of three DNA extraction kits on human whole-exome data from formalin-fixed paraffin-embedded normal and tumor samples
PLOS ONE 2018 13(4)
doi: 10.1371/journal.pone.0195471

Guissart C et al.
Dual Molecular Effects of Dominant RORA Mutations Cause Two Variants of Syndromic Intellectual Disability with Either Autism or Cerebellar Ataxia
The American Journal of Human Genetics 2018 102(5)
doi: 10.1016/j.ajhg.2018.02.021

Robinson CM et al.
Consequences of VHL Loss on Global DNA Methylome
Scientific Reports 2018 8(1)
doi: 10.1038/s41598-018-21524-5

Brucato N et al.
The Comoros Show the Earliest Austronesian Gene Flow into the Swahili Corridor
The American Journal of Human Genetics 2018 102(1)
doi: 10.1016/j.ajhg.2017.11.011

Varet H et al.
Enteric bacteria boost defences against oxidative stress in Entamoeba histolytica
Scientific Reports 2018 8(1)
doi: 10.1038/s41598-018-27086-w

Cruaud A et al.
Using insects to detect, monitor and predict the distribution of Xylella fastidiosa: a case study in Corsica
Scientific Reports 2018 8(1)
doi: 10.1038/s41598-018-33957-z

Salomez M et al.
Microbial communities in natural rubber coagula during maturation: impacts on technological properties of dry natural rubber
Journal of Applied Microbiology 2018 124(2)
doi: 10.1111/jam.13661

Kojadinovic-Sirinelli M et al.
Exploring the microbiome of the “star” freshwater diatom Asterionella formosa
in a laboratory context
Environmental Microbiology 2018 20(10)
doi: 10.1111/1462-2920.14337

Mercier J et al.
GROOLS: reactive graph reasoning for genome annotation through biological processes
BMC Bioinformatics 2018 19(1)
doi: 10.1186/s12859-018-2126-1

Gruening B et al.
Recommendations for the packaging and containerizing of bioinformatics software
F1000Research 2018 7
doi: 10.12688/f1000research.15140.1