Biomics

Anvita Bhargava et al.
Transcriptomic analysis of sorted lung cells revealed a proviral activity of the NF-κB pathway toward SARS-CoV-2
iScience 2023, vol. 26, issue 12
doi: 10.1016/j.isci.2023.108449

Selene E. Di Carlo et al.
Depletion of slow-cycling PDGFRα+ADAM12+ mesenchymal cells promotes antitumor immunity by restricting macrophage efferocytosis
Nature Immunology 2023, vol. 24, issue 11
doi: 10.1038/s41590-023-01642-7

Hugo Caro et al.
BioConvert: a comprehensive format converter for life sciences
NAR Genomics and Bioinformatics 2023, vol. 5, issue 3
doi: 10.1093/nargab/lqad074

Aurélie Delumeau et al.
Bacterial microbiota management in free-living amoebae (Heterolobosea lineage) isolated from water: The impact of amoebae identity, grazing conditions, and passage number
Science of The Total Environment 2023, vol. 900
doi: 10.1016/j.scitotenv.2023.165816

Wladimir Malaga et al.
Natural mutations in the sensor kinase of the PhoPR two-component regulatory system modulate virulence of ancestor-like tuberculosis bacilli
PLOS Pathogens 2023, vol. 19, issue 7
doi: 10.1371/journal.ppat.1011437

Thomas Cokelaer et al.
Reprohackathons: promoting reproducibility in bioinformatics through training
Bioinformatics 2023, vol. 39, issue Supplement_1
doi: 10.1093/bioinformatics/btad227

Marta Lourenço et al.
Phages against Noncapsulated Klebsiella pneumoniae: Broader Host range, Slower Resistance
Microbiology Spectrum 2023
doi: 10.1128/spectrum.04812-22

Quentin Lamy-Besnier et al.
Chromosome folding and prophage activation reveal specific genomic architecture for intestinal bacteria
Microbiome 2023, vol. 11, issue 1
doi: 10.1186/s40168-023-01541-x

Emile Auria et al.
Extracellular succinate induces spatially organized biofilm formation in Clostridioides difficile
Biofilm 2023, vol. 5
doi: 10.1016/j.bioflm.2023.100125

Jack-Christophe Cossec et al.
Transient suppression of SUMOylation in embryonic stem cells generates embryo-like structures
Cell Reports 2023, vol. 42, issue 4
doi: 10.1016/j.celrep.2023.112380