MicroScope

David Vallenet et al.
MicroScope: an integrated platform for the annotation and exploration of microbial gene functions through genomic, pangenomic and metabolic comparative analysis
Nucleic Acids Research 2019
doi: 10.1093/nar/gkz926

Duchemin W et al.
RecPhyloXML: a format for reconciled gene trees
Bioinformatics 2018 34(21)
doi: 10.1093/bioinformatics/bty389

Desroches M et al.
The Odyssey of the Ancestral Escherich Strain through Culture Collections: an Example of Allopatric Diversification
mSphere 2018 3(1)
doi: 10.1128/mSphere.00553-17

Belkhelfa S et al.
Complete Genome Sequence of the Facultative Methylotroph
Methylobacterium extorquens
TK 0001 Isolated from Soil in Poland
Genome Announcements 2018 6(8)
doi: 10.1128/genomeA.00018-18

Turpin W et al.
The genomic and transcriptomic basis of the potential of Lactobacillus plantarum A6 to improve the nutritional quality of a cereal based fermented food
International Journal of Food Microbiology 2018 266
doi: 10.1016/j.ijfoodmicro.2017.10.011

Gobet A et al.
Evolutionary Evidence of Algal Polysaccharide Degradation Acquisition by Pseudoalteromonas carrageenovora 9T to Adapt to Macroalgal Niches
Frontiers in Microbiology 2018 9
doi: 10.3389/fmicb.2018.02740

Rainer Borriss R et al.
Bacillus subtilis,
the model Gram-positive bacterium: 20 years of annotation refinement
Microbial Biotechnology 2017 11(1)
doi: 10.1111/1751-7915.13043

Clerissi C et al.
Parallels between experimental and natural evolution of legume symbionts
Nature Communications 2018 9(1)
doi: 10.1038/s41467-018-04778-5

Dias GM et al.
Vibrio tapetis Displays an Original Type IV Secretion System in Strains Pathogenic for Bivalve Molluscs
Frontiers in Microbiology 2018 9
doi: 10.3389/fmicb.2018.00227

Krin E et al.
Expansion of the SOS regulon of Vibrio cholerae through extensive transcriptome analysis and experimental validation
BMC Genomics 2018 19(1)
doi: 10.1186/s12864-018-4716-8