Développement Bioinfo

Nathalie Grafféo et al.
ipcwswitch: An R package for inverse probability of censoring weighting with an application to switches in clinical trials
Computers in Biology and Medicine 2019, vol. 111
doi: 10.1016/j.compbiomed.2019.103339

Mathias Lorieux et al.
NOISYmputer: genotype imputation in bi-parental populations for noisy low-coverage next-generation sequencing data
2019
doi: 10.1101/658237

Krin E et al.
Expansion of the SOS regulon of Vibrio cholerae through extensive transcriptome analysis and experimental validation
BMC Genomics 2018 19(1)
doi: 10.1186/s12864-018-4716-8

Claverie JM et al.
Mimiviridae: An Expanding Family of Highly Diverse Large dsDNA Viruses Infecting a Wide Phylogenetic Range of Aquatic Eukaryotes
Viruses 2018 10(9)
doi: 10.3390/v10090506

Kojadinovic-Sirinelli M et al.
Exploring the microbiome of the “star” freshwater diatom Asterionella formosa
in a laboratory context
Environmental Microbiology 2018 20(10)
doi: 10.1111/1462-2920.14337

Belahbib H et al.
New genomic data and analyses challenge the traditional vision of animal epithelium evolution
BMC Genomics 2018 19(1)
doi: 10.1186/s12864-018-4715-9

Mercier J et al.
GROOLS: reactive graph reasoning for genome annotation through biological processes
BMC Bioinformatics 2018 19(1)
doi: 10.1186/s12859-018-2126-1

Royer G et al.
PlaScope: a targeted approach to assess the plasmidome from genome assemblies at the species level
Microbial Genomics 2018 4(9)
doi: 10.1099/mgen.0.000211

Belser C et al.
Chromosome-scale assemblies of plant genomes using nanopore long reads and optical maps
Nature Plants 2018 4(11)
doi: 10.1038/s41477-018-0289-4

Varet H et al.
checkMyIndex: a web-based R/Shiny interface for choosing compatible sequencing indexes
Bioinformatics 2018 35(5)
doi: 10.1093/bioinformatics/bty706