Publications 2017

Gies V. et al.
B cells differentiate in Human thymus and express AIRE.
J Allergy Clin Immunol. (2017) Mar. 139(3):1049-1052.e12.
doi: 10.1016/j.jaci.2016.09.044

Oger PM.et al.
Complete genome sequence of the hyperthermophilic Piezophilic Archaeon Pyrococcus kukulkanii NCB100 isolated from the Rebecca's roost hydrothermal vent in the Guaymas basin.
Genome Announc. (2017) Feb. 5(7). pii: e01667-16.
doi: 10.1128/genomeA.01667-16

Castelin M. et al.
Untangling species identity in gastropods with polymorphic shells in the genus Bolma Risso, 1826 (Mollusca, Vetigastropoda).
Eur J Taxon (2017) Feb. 288:1-21.
doi: 10.5852/ejt.2017.288

Zhukova A. et al.
Genome-wide transcriptional start site mapping and sRNA identification in the pathogen Leptospira interrogans.
Front Cell Infect Microbiol. (2017) Jan. 7:10.
doi: 10.3389/fcimb.2017.00010

Lassalle F. et al.
Ancestral genome estimation reveals the history of ecological diversification in Agrobacterium.
Genome Biol Evol. (2017) Dec. 9(12):3413-3431.
doi: 10.1093/gbe/evx255

Cerino M. et al.
Genetic characterization of a French cohort of GNE-mutation negative inclusion body myopathy patients with exome sequencing.
Muscle Nerve (2017) Nov. 56(5):993-997.
doi: 10.1002/mus.25638

Ficko-Blean E. et al.
Carrageenan catabolism is encoded by a complex regulon in marine heterotrophic bacteria.
Nat Commun. (2017) Nov. 8(1):1685.
doi: 10.1038/s41467-017-01832-6

Danchin EGJ. et al.
The transcriptomes of Xiphinema index and Longidorus elongatus suggest independent acquisition of some plant parasitism genes by horizontal gene transfer in early-branching Nematodes.
Genes (2017) Oct. 8(10). pii: E287.
doi: 10.3390/genes8100287

Arrigoni R. et al.
A new sequence data set of SSU rRNA gene for Scleractinia and its phylogenetic and ecological applications.
Mol Ecol Resour. (2017) Sep. 17(5):1054-1071.
doi: 10.1111/1755-0998.12640

Garcia-Seco D. et al.
Transcriptome and proteome analysis reveal new insight into proximal and distal responses of wheat to foliar infection by Xanthomonas translucens.
Sci Rep. (2017) Aug.7(1):10157.
doi: 10.1038/s41598-017-10568-8

Morchikh M. et al.
HEXIM1 and NEAT1 long non-coding RNA form a multi-subunit complex that regulates DNA-mediated innate immune response.
Mol Cell. (2017) Aug. 67(3):387-399.e5.
doi: 10.1016/j.molcel.2017.06.020

Czimmerer Z. et al.
Extensive and functional overlap of the STAT6 and RXR cistromes in the active enhancer repertoire of human CD14+ monocyte derived differentiating macrophages.
Mol Cell Endocrinol. (2017) Jul. pii: S0303-7207(17)30414-8.
doi: 10.1016/j.mce.2017.07.034

Badouin H. et al.
The sunflower genome provides insights into oil metabolism, flowering and Asterid evolution.
Nature (2017) Jun. 546:148–152.
doi: 10.1038/nature22380

Jegu T. et al.
The Arabidopsis SWI/SNF protein BAF60 mediates seedling growth control by modulating DNA accessibility.
Genome Biol. (2017) Jun. 18(1):114.
doi: 10.1186/s13059-017-1246-7

Eckenfelder A. et al.
Argonaute proteins regulate HIV-1 multiply spliced RNA and viral production in a Dicer independent manner.
Nucleic Acids Res. (2017) Apr. 45(7):4158-4173.
doi: 10.1093/nar/gkw1289

Suchon P. et al.
Protein S Heerlen mutation heterozygosity is associated with venous thrombosis risk.
Sci Rep. (2017) Apr. 7:45507.
doi: 10.1038/srep45507

Bouschet T. et al.
In Vitro corticogenesis from embryonic stem cells recapitulates the in vivo epigenetic control of imprinted gene expression.
Cereb Cortex. (2017) Mar. 27:2418-2433
doi: 10.1093/cercor/bhw102

Villain A.et al.
Complete mitochondrial genome sequence of the freshwater diatom Asterionella Formosa.
Mitochondrial DNA Part B (2017) Feb . 2:1, 97-98.
doi: 10.1080/23802359.2017.1285210

Istace B. et al.
De novo assembly and population genomic survey of natural yeast isolates with the Oxford Nanopore MinION sequencer.
Gigascience (2017) Feb. 6(2):1-13.
doi: 10.10 93/gigascience/giw018

Pancrace C. et al.
Insights into the Planktothrix genus: Genomic and metabolic comparison of benthic and planktic strains.
Sci Rep. (2017) Jan. 7:41181.
doi: 10.1038/srep41181

Benjamin Istace et al.
de novo assembly and population genomic survey of natural yeast isolates with the Oxford Nanopore MinION sequencer
GigaScience 2017, vol. 6, issue 2
doi: 10.1093/gigascience/giw018

Duyen T Bui et al.
Mismatch Repair Incompatibilities in Diverse Yeast Populations
Genetics 2017, vol. 205, issue 4
doi: 10.1534/genetics.116.199513