Publications 2018

Torres-Cortés G et al.
Functional Microbial Features Driving Community Assembly During Seed Germination and Emergence
Frontiers in Plant Science 2018 9
doi: 10.3389/fpls.2018.00902

Zarrillo S et al.
The use and domestication of Theobroma cacao during the mid-Holocene in the upper Amazon
Nature Ecology & Evolution 2018 2(12)
doi: 10.1038/s41559-018-0697-x

Majda Arif et al.
Discovering millions of plankton genomic markers from the Atlantic Ocean and the Mediterranean Sea
Molecular Ecology Resources 2018, vol. 19, issue 2
doi: 10.1111/1755-0998.12985

Pau Erola et al.
Learning Differential Module Networks Across Multiple Experimental Conditions
Methods in Molecular Biology 2018
doi: 10.1007/978-1-4939-8882-2_13

Marion Salou et al.
A common transcriptomic program acquired in the thymus defines tissue residency of MAIT and NKT subsets
The Journal of Experimental Medicine 2018, vol. 216, issue 1
doi: 10.1084/jem.20181483

Médine Benchouaia et al.
Comparative Transcriptomics Highlights New Features of the Iron Starvation Response in the Human Pathogen Candida glabrata
Frontiers in Microbiology 2018, vol. 9
doi: 10.3389/fmicb.2018.02689

Delphine Mieulet et al.
Unleashing meiotic crossovers in crops
Nature Plants 2018, vol. 4, issue 12
doi: 10.1038/s41477-018-0311-x

Yann Pecrix et al.
Sunflower resistance to multiple downy mildew pathotypes revealed by recognition of conserved effectors of the oomycete Plasmopara halstedii
The Plant Journal 2018, vol. 97, issue 4
doi: 10.1111/tpj.14157

Franc-Christophe Baurens et al.
Recombination and Large Structural Variations Shape Interspecific Edible Bananas Genomes
Molecular Biology and Evolution 2018, vol. 36, issue 1
doi: 10.1093/molbev/msy199

Artem Kim et al.
Integrated clinical and omics approach to rare diseases: novel genes and oligogenic inheritance in holoprosencephaly
Brain 2018, vol. 142, issue 1
doi: 10.1093/brain/awy290

Caroline Belser et al.
Chromosome-scale assemblies of plant genomes using nanopore long reads and optical maps
Nature Plants 2018, vol. 4, issue 11
doi: 10.1038/s41477-018-0289-4

Mélanie Morin-Brureau et al.
Microglial phenotypes in the human epileptic temporal lobe
Brain 2018, vol. 141, issue 12
doi: 10.1093/brain/awy276

Nadine AME van der Beek et al.
A new case of SMA phenotype without epilepsy due to biallelic variants in ASAH1
European Journal of Human Genetics 2018, vol. 27, issue 3
doi: 10.1038/s41431-018-0250-z

Nadine AME van der Beek et al.
A new case of SMA phenotype without epilepsy due to biallelic variants in ASAH1
European Journal of Human Genetics 2018, vol. 27, issue 3
doi: 10.1038/s41431-018-0250-z

Marie-Odile Baudement et al.
High-salt–recovered sequences are associated with the active chromosomal compartment and with large ribonucleoprotein complexes including nuclear bodies
Genome Research 2018, vol. 28, issue 11
doi: 10.1101/gr.237073.118

Philippe Silar et al.
A gene graveyard in the genome of the fungus Podospora comata
Molecular Genetics and Genomics 2018, vol. 294, issue 1
doi: 10.1007/s00438-018-1497-3

Sara Masachis et al.
FASTBAC-Seq: Functional Analysis of Toxin–Antitoxin Systems in Bacteria by Deep Sequencing
Methods in Enzymology 2018
doi: 10.1016/bs.mie.2018.08.033

Wei-Jia Zhang et al.
Complete genome sequence of Shewanella benthica DB21MT-2, an obligate piezophilic bacterium isolated from the deepest Mariana Trench sediment
Marine Genomics 2018, vol. 44
doi: 10.1016/j.margen.2018.09.001

Camille Marchet et al.
De novoclustering of long reads by gene from transcriptomics data
Nucleic Acids Research 2018, vol. 47, issue 1
doi: 10.1093/nar/gky834

L. Allach El Khattabi et al.
Performance of semiconductor sequencing platform for non‐invasive prenatal genetic screening for fetal aneuploidy: results from a multicenter prospective cohort study in a clinical setting
Ultrasound in Obstetrics & Gynecology 2018, vol. 54, issue 2
doi: 10.1002/uog.20112

L. Allach El Khattabi et al.
Performance of semiconductor sequencing platform for non‐invasive prenatal genetic screening for fetal aneuploidy: results from a multicenter prospective cohort study in a clinical setting
Ultrasound in Obstetrics & Gynecology 2018, vol. 54, issue 2
doi: 10.1002/uog.20112

Hugo Varet et al.
checkMyIndex: a web-based R/Shiny interface for choosing compatible sequencing indexes
Bioinformatics 2018, vol. 35, issue 5
doi: 10.1093/bioinformatics/bty706

Kanchan Karmakar et al.
Transcriptomic Analysis With the Progress of Symbiosis in ‘Crack-Entry’ Legume Arachis hypogaea Highlights Its Contrast With ‘Infection Thread’ Adapted Legumes
Molecular Plant-Microbe Interactions 2018, vol. 32, issue 3
doi: 10.1094/mpmi-06-18-0174-r

Miguel M. Pinto et al.
Sarcomeric disorganization and nemaline bodies in muscle biopsies of patients with EXOSC3 ‐related type 1 pontocerebellar hypoplasia
Muscle & Nerve 2018
doi: 10.1002/mus.26305

Marion Imbert-Bouteille et al.
LARP7 variants and further delineation of the Alazami syndrome phenotypic spectrum among primordial dwarfisms: 2 sisters
European Journal of Medical Genetics 2018, vol. 62, issue 3
doi: 10.1016/j.ejmg.2018.07.003

Irene Jiménez et al.
Circulating tumor DNA analysis enables molecular characterization of pediatric renal tumors at diagnosis
International Journal of Cancer 2018, vol. 144, issue 1
doi: 10.1002/ijc.31620

L. Mondoulet et al.
Gata3 hypermethylation and Foxp3 hypomethylation are associated with sustained protection and bystander effect following epicutaneous immunotherapy in peanut‐sensitized mice
Allergy 2018, vol. 74, issue 1
doi: 10.1111/all.13479

Bénédicte Stengel et al.
Risk profile, quality of life and care of patients with moderate and advanced CKD: The French CKD-REIN Cohort Study
Nephrology Dialysis Transplantation 2018, vol. 34, issue 2
doi: 10.1093/ndt/gfy058

Kaori Sakai et al.
Combining laser-assisted microdissection (LAM) and RNA-seq allows to perform a comprehensive transcriptomic analysis of epidermal cells of Arabidopsis embryo
Plant Methods 2018, vol. 14, issue 1
doi: 10.1186/s13007-018-0275-x

Maria-Teresa Dotti et al.
Discordant manifestations in Italian brothers with GNE myopathy
Journal of the Neurological Sciences 2018, vol. 386
doi: 10.1016/j.jns.2018.01.002