Publications
Susanna Säisä-Borreill et al.
General transcription factor TAF4 antagonizes epigenetic silencing by Polycomb to maintain intestine stem cell functions
Cell Death & Differentiation 2023, vol. 30, issue 3
doi: 10.1038/s41418-022-01109-6
Maxime Allioux et al.
A metagenomic insight into the microbiomes of geothermal springs in the Subantarctic Kerguelen Islands
Scientific Reports 2022, vol. 12, issue 1
doi: 10.1038/s41598-022-26299-4
Charlotte Nef et al.
Whole-genome scanning reveals environmental selection mechanisms that shape diversity in populations of the epipelagic diatom Chaetoceros
PLOS Biology 2022, vol. 20, issue 11
doi: 10.1371/journal.pbio.3001893
Anthony Bertucci et al.
Impact of environmental micropollutants and diet composition on the gut microbiota of wild european eels (Anguilla anguilla)
Environmental Pollution 2022, vol. 314
doi: 10.1016/j.envpol.2022.120207
Damien Piel et al.
Phage–host coevolution in natural populations
Nature Microbiology 2022, vol. 7, issue 7
doi: 10.1038/s41564-022-01157-1
Joshua Malsa et al.
Effect of sainfoin (Onobrychis viciifolia) on cyathostomin eggs excretion, larval development, larval community structure and efficacy of ivermectin treatment in horses
Parasitology 2022, vol. 149, issue 11
doi: 10.1017/s0031182022000853
Roba Mohamad et al.
Mesorhizobium ventifaucium sp. nov. and Mesorhizobium escarrei sp. nov., two novel root-nodulating species isolated from Anthyllis vulneraria
Systematic and Applied Microbiology 2022, vol. 45, issue 5
doi: 10.1016/j.syapm.2022.126341
Daniel J Richter et al.
Genomic evidence for global ocean plankton biogeography shaped by large-scale current systems
eLife 2022, vol. 11
doi: 10.7554/elife.78129
Naama Lang-Yona et al.
Terrestrial and marine influence on atmospheric bacterial diversity over the north Atlantic and Pacific Oceans
Communications Earth & Environment 2022, vol. 3, issue 1
doi: 10.1038/s43247-022-00441-6
Marion Allaoua et al.
A carvacrol-based product reduces Campylobacter jejuni load and alters microbiota composition in the caeca of chickens
Journal of Applied Microbiology 2022, vol. 132, issue 6
doi: 10.1111/jam.15521
C. M. Singleton et al.
The novel genus, ‘Candidatus Phosphoribacter’, previously identified as Tetrasphaera, is the dominant polyphosphate accumulating lineage in EBPR wastewater treatment plants worldwide
The ISME Journal 2022
doi: 10.1038/s41396-022-01212-z
Pedro Goncalves et al.
Defects in mucosal immunity and nasopharyngeal dysbiosis in HSC-transplanted SCID patients with IL2RG/JAK3 deficiency
Blood 2022, vol. 139, issue 17
doi: 10.1182/blood.2021014654
Juan José Pierella Karlusich et al.
A robust approach to estimate relative phytoplankton cell abundances from metagenomes
Molecular Ecology Resources 2022
doi: 10.1111/1755-0998.13592
Lukas Hafner et al.
Listeria monocytogenes faecal carriage is common and depends on the gut microbiota
Nature Communications 2021, vol. 12, issue 1
doi: 10.1038/s41467-021-27069-y
Marta Royo-Llonch et al.
Compendium of 530 metagenome-assembled bacterial and archaeal genomes from the polar Arctic Ocean
Nature Microbiology 2021, vol. 6, issue 12
doi: 10.1038/s41564-021-00979-9
Sourakhata Tirera et al.
The Influence of Habitat on Viral Diversity in Neotropical Rodent Hosts
Viruses 2021, vol. 13, issue 9
doi: 10.3390/v13091690
Samuel Chaffron et al.
Environmental vulnerability of the global ocean epipelagic plankton community interactome
Science Advances 2021, vol. 7, issue 35
doi: 10.1126/sciadv.abg1921
Manoela C. Brandão et al.
Macroscale patterns of oceanic zooplankton composition and size structure
Scientific Reports 2021, vol. 11, issue 1
doi: 10.1038/s41598-021-94615-5
Juan José Pierella Karlusich et al.
Global distribution patterns of marine nitrogen-fixers by imaging and molecular methods
Nature Communications 2021, vol. 12, issue 1
doi: 10.1038/s41467-021-24299-y
David Pérez-Pascual et al.
Sustainable plant-based diets promote rainbow trout gut microbiota richness and do not alter resistance to bacterial infection
Animal Microbiome 2021, vol. 3, issue 1
doi: 10.1186/s42523-021-00107-2
Laetitia Travier et al.
Neonatal susceptibility to meningitis results from the immaturity of epithelial barriers and gut microbiota
Cell Reports 2021, vol. 35, issue 13
doi: 10.1016/j.celrep.2021.109319
Etienne Labussière et al.
Saccharomyces cerevisiae boulardii CNCM I-1079 supplementation in finishing male pigs helps to cope with heat stress through feeding behaviour and gut microbiota modulation
British Journal of Nutrition 2021, vol. 127, issue 3
doi: 10.1017/s0007114521001756
Juan José Pierella Karlusich et al.
Carbon Dioxide Concentration Mechanisms in Natural Populations of Marine Diatoms: Insights From Tara Oceans
Frontiers in Plant Science 2021, vol. 12
doi: 10.3389/fpls.2021.657821
et al.
Frühgeborene: Entwicklungsneurologische Folgen der Schilddrüsendysfunktion
Neonatologie Scan 2021, vol. 10, issue 01
doi: 10.1055/a-1255-3984
Quentin Carradec et al.
A framework for in situ molecular characterization of coral holobionts using nanopore sequencing
Scientific Reports 2020, vol. 10, issue 1
doi: 10.1038/s41598-020-72589-0
Lydie Kerdraon et al.
Impact of a resistance gene against a fungal pathogen on the plant host residue microbiome: The case of the Leptosphaeria maculans–Brassica napus pathosystem
Molecular Plant Pathology 2020, vol. 21, issue 12
doi: 10.1111/mpp.12994
Dominique Arrouays et al.
Impacts of national scale digital soil mapping programs in France
Geoderma Regional 2020, vol. 23
doi: 10.1016/j.geodrs.2020.e00337
Hisashi Endo et al.
Biogeography of marine giant viruses reveals their interplay with eukaryotes and ecological functions
Nature Ecology & Evolution 2020, vol. 4, issue 12
doi: 10.1038/s41559-020-01288-w
Stevenn Volant et al.
SHAMAN: a user-friendly website for metataxonomic analysis from raw reads to statistical analysis
BMC Bioinformatics 2020, vol. 21, issue 1
doi: 10.1186/s12859-020-03666-4
Romuald Laso‐Jadart et al.
Investigating population‐scale allelic differential expression in wild populations of Oithona similis (Cyclopoida, Claus, 1866)
Ecology and Evolution 2020, vol. 10, issue 16
doi: 10.1002/ece3.6588