Publications 2023

Alexandre How-Kit et al.
The CEPH aging cohort and biobank: a valuable collection of biological samples from exceptionally long-lived French individuals and their offspring for longevity studies
GeroScience 2023, vol. 46, issue 2
doi: 10.1007/s11357-023-01037-4

Blandine Trouche et al.
Distribution and genomic variation of ammonia-oxidizing archaea in abyssal and hadal surface sediments
ISME Communications 2023, vol. 3, issue 1
doi: 10.1038/s43705-023-00341-6

Hélène Bugaut et al.
A conserved transcriptional program for MAIT cells across mammalian evolution
Journal of Experimental Medicine 2023, vol. 221, issue 2
doi: 10.1084/jem.20231487

Ali Tawbeh et al.
Immune response of BV-2 microglial cells is impacted by peroxisomal beta-oxidation
Frontiers in Molecular Neuroscience 2023, vol. 16
doi: 10.3389/fnmol.2023.1299314

Claudia Bartoli et al.
The genetic architecture of the adaptive potential of Arabidopsis thaliana in response to Pseudomonas syringae strains isolated from south‐west France
Plant Pathology 2023
doi: 10.1111/ppa.13849

Mariana Galvão Ferrarini et al.
Coordination of host and endosymbiont gene expression governs endosymbiont growth and elimination in the cereal weevil Sitophilus spp.
Microbiome 2023, vol. 11, issue 1
doi: 10.1186/s40168-023-01714-8

Rekha Gopalan-Nair et al.
Transcriptomic profiling reveals host-specific evolutionary pathways promoting enhanced fitness in the plant pathogen Ralstonia pseudosolanacearum
Microbial Genomics 2023, vol. 9, issue 12
doi: 10.1099/mgen.0.001142

Jawad Alharake et al.
Effect of the res2 transcription factor gene deletion on protein secretion and stress response in the hyperproducer strain Trichoderma reesei Rut-C30
BMC Microbiology 2023, vol. 23, issue 1
doi: 10.1186/s12866-023-03125-z

Lara Al Zouabi et al.
Molecular underpinnings and environmental drivers of loss of heterozygosity in Drosophila intestinal stem cells
Cell Reports 2023, vol. 42, issue 12
doi: 10.1016/j.celrep.2023.113485

Anne Postec et al.
Marinitoga aeolica sp. nov., a novel thermophilic anaerobic heterotroph isolated from a shallow hydrothermal field of Panarea Island in the Aeolian archipelago, Italy
International Journal of Systematic and Evolutionary Microbiology 2023, vol. 73, issue 11
doi: 10.1099/ijsem.0.006186

Christophe Papin et al.
MBD4 loss results in global reactivation of promoters and retroelements with low methylated CpG density
Journal of Experimental & Clinical Cancer Research 2023, vol. 42, issue 1
doi: 10.1186/s13046-023-02882-z

Anvita Bhargava et al.
Transcriptomic analysis of sorted lung cells revealed a proviral activity of the NF-κB pathway toward SARS-CoV-2
iScience 2023, vol. 26, issue 12
doi: 10.1016/j.isci.2023.108449

Mélanie Bazin-Gélis et al.
Inter-generational nuclear crosstalk links the control of gene expression to programmed genome rearrangement during the Paramecium sexual cycle
Nucleic Acids Research 2023, vol. 51, issue 22
doi: 10.1093/nar/gkad1006

Sofia Rigou et al.
Pithoviruses Are Invaded by Repeats That Contribute to Their Evolution and Divergence from Cedratviruses
Molecular Biology and Evolution 2023, vol. 40, issue 11
doi: 10.1093/molbev/msad244

Lucas Bonometti et al.
Draft genome sequences of Neurospora crassa clade B, isolated from burned Cytisus sp. plants in France
Microbiology Resource Announcements 2023
doi: 10.1128/mra.00627-23

Morgane Corre et al.
Alternative splicing induced by bacterial pore-forming toxins sharpens CIRBP-mediated cell response to Listeria infection
Nucleic Acids Research 2023, vol. 51, issue 22
doi: 10.1093/nar/gkad1033

Jill Pilet et al.
Preneoplastic liver colonization by 11p15.5 altered mosaic cells in young children with hepatoblastoma
Nature Communications 2023, vol. 14, issue 1
doi: 10.1038/s41467-023-42418-9

Pietro Berico et al.
Super-enhancer-driven expression of BAHCC1 promotes melanoma cell proliferation and genome stability
Cell Reports 2023, vol. 42, issue 11
doi: 10.1016/j.celrep.2023.113363

Arthur Monjot et al.
Functional diversity of microbial eukaryotes in a meromictic lake: Coupling between metatranscriptomic and a trait‐based approach
Environmental Microbiology 2023
doi: 10.1111/1462-2920.16531

Thomas Husson et al.
Episignatures in practice: independent evaluation of published episignatures for the molecular diagnostics of ten neurodevelopmental disorders
European Journal of Human Genetics 2023
doi: 10.1038/s41431-023-01474-x

María-Jesús Lobón-Iglesias et al.
Imaging and multi-omics datasets converge to define different neural progenitor origins for ATRT-SHH subgroups
Nature Communications 2023, vol. 14, issue 1
doi: 10.1038/s41467-023-42371-7

Selene E. Di Carlo et al.
Depletion of slow-cycling PDGFRα+ADAM12+ mesenchymal cells promotes antitumor immunity by restricting macrophage efferocytosis
Nature Immunology 2023, vol. 24, issue 11
doi: 10.1038/s41590-023-01642-7

Jérôme Trotereau et al.
Construction and characterization of a saturated Tn-seq library of Salmonella Typhimurium ATCC 14028
Microbiology Resource Announcements 2023, vol. 12, issue 11
doi: 10.1128/mra.00365-23

Fabien Pierron et al.
Sex-specific DNA methylation and transcription of zbtb38 and effects of gene–environment interactions on its natural antisense transcript in zebrafish
Epigenetics 2023, vol. 18, issue 1
doi: 10.1080/15592294.2023.2260963

Louis Paré et al.
Transcriptomic landscape of posterior regeneration in the annelid Platynereis dumerilii
BMC Genomics 2023, vol. 24, issue 1
doi: 10.1186/s12864-023-09602-z

Hiroto Kaneko et al.
Predicting global distributions of eukaryotic plankton communities from satellite data
ISME Communications 2023, vol. 3, issue 1
doi: 10.1038/s43705-023-00308-7

Ana Raquel Melo de Farias et al.
Amyloid-Beta Peptides Trigger Premature Functional and Gene Expression Alterations in Human-Induced Neurons
Biomedicines 2023, vol. 11, issue 9
doi: 10.3390/biomedicines11092564

Wenwen Gao et al.
Human GLP1R variants affecting GLP1R cell surface expression are associated with impaired glucose control and increased adiposity
Nature Metabolism 2023, vol. 5, issue 10
doi: 10.1038/s42255-023-00889-6

Roseline Vibert et al.
Molecular characterisation of tumours of the lacrimal apparatus
Histopathology 2023
doi: 10.1111/his.15040

David Gentien et al.
Multi-omics comparison of malignant and normal uveal melanocytes reveals molecular features of uveal melanoma
Cell Reports 2023, vol. 42, issue 9
doi: 10.1016/j.celrep.2023.113132