Publications 2022

Claude Rispe et al.
Transcriptome of the synganglion in the tick Ixodes ricinus and evolution of the cys-loop ligand-gated ion channel family in ticks
BMC Genomics 2022, vol. 23, issue 1
doi: 10.1186/s12864-022-08669-4

Pierre Lopez et al.
Genomic characterization of Tenacibaculum maritimum O‐antigen gene cluster and development of a multiplex PCR‐based serotyping scheme
Transboundary and Emerging Diseases 2022
doi: 10.1111/tbed.14637

Mishal Cohen-Rengifo et al.
The extensive transgenerational transcriptomic effects of ocean acidification on the olfactory epithelium of a marine fish are associated with a better viral resistance
BMC Genomics 2022, vol. 23, issue 1
doi: 10.1186/s12864-022-08647-w

Roba Mohamad et al.
Mesorhizobium ventifaucium sp. nov. and Mesorhizobium escarrei sp. nov., two novel root-nodulating species isolated from Anthyllis vulneraria
Systematic and Applied Microbiology 2022, vol. 45, issue 5
doi: 10.1016/j.syapm.2022.126341

Muriel Rhinn et al.
Aberrant induction of p19Arf-mediated cellular senescence contributes to neurodevelopmental defects
PLOS Biology 2022, vol. 20, issue 6
doi: 10.1371/journal.pbio.3001664

Guillermo Dominguez-Huerta et al.
Diversity and ecological footprint of Global Ocean RNA viruses
Science 2022, vol. 376, issue 6598
doi: 10.1126/science.abn6358

Jonathan Charaix et al.
Recirculating Foxp3+ regulatory T cells are restimulated in the thymus under Aire control
Cellular and Molecular Life Sciences 2022, vol. 79, issue 7
doi: 10.1007/s00018-022-04328-9

Bertrand Theulot et al.
Genome-wide mapping of individual replication fork velocities using nanopore sequencing
Nature Communications 2022, vol. 13, issue 1
doi: 10.1038/s41467-022-31012-0

Juan José Pierella Karlusich et al.
Coupling Imaging and Omics in Plankton Surveys: State-of-the-Art, Challenges, and Future Directions
Frontiers in Marine Science 2022, vol. 9
doi: 10.3389/fmars.2022.878803

Jessica Sriha et al.
BET and CDK Inhibition Reveal Differences in the Proliferation Control of Sympathetic Ganglion Neuroblasts and Adrenal Chromaffin Cells
Cancers 2022, vol. 14, issue 11
doi: 10.3390/cancers14112755

Maëlle Daunesse et al.
ePeak: from replicated chromatin profiling data to epigenomic dynamics
NAR Genomics and Bioinformatics 2022, vol. 4, issue 2
doi: 10.1093/nargab/lqac041

Laia Richart et al.
XIST loss impairs mammary stem cell differentiation and increases tumorigenicity through Mediator hyperactivation
Cell 2022, vol. 185, issue 12
doi: 10.1016/j.cell.2022.04.034

Naama Lang-Yona et al.
Terrestrial and marine influence on atmospheric bacterial diversity over the north Atlantic and Pacific Oceans
Communications Earth & Environment 2022, vol. 3, issue 1
doi: 10.1038/s43247-022-00441-6

Jan Smyčka et al.
Tempo and drivers of plant diversification in the European mountain system
Nature Communications 2022, vol. 13, issue 1
doi: 10.1038/s41467-022-30394-5

Andrew J. Jasonowicz et al.
Generation of a chromosome‐level genome assembly for Pacific halibut ( Hippoglossus stenolepis ) and characterization of its sex‐determining genomic region
Molecular Ecology Resources 2022
doi: 10.1111/1755-0998.13641

Victoria Mesa et al.
Core-, pan- and accessory genome analyses of Clostridium neonatale: insights into genetic diversity
Microbial Genomics 2022, vol. 8, issue 5
doi: 10.1099/mgen.0.000813

Caroline Vernette et al.
The Ocean Gene Atlas v2.0: online exploration of the biogeography and phylogeny of plankton genes
Nucleic Acids Research 2022
doi: 10.1093/nar/gkac420

Isabel Paiva et al.
Caffeine intake exerts dual genome-wide effects on hippocampal metabolism and learning-dependent transcription
Journal of Clinical Investigation 2022, vol. 132, issue 12
doi: 10.1172/jci149371

Anne Soisig Steunou et al.
New insights into the mechanism of iron transport through the bacterial Ftr system present in pathogens
The FEBS Journal 2022
doi: 10.1111/febs.16476

Rémi Tournebize et al.
Ecological and genomic vulnerability to climate change across native populations of Robusta coffee ( Coffea canephora )
Global Change Biology 2022, vol. 28, issue 13
doi: 10.1111/gcb.16191

Célia Carbonne et al.
Metatranscriptomics of cheese microbial communities: Efficiency of RNA extraction from various cheese types and of mRNA enrichment
International Journal of Food Microbiology 2022, vol. 373
doi: 10.1016/j.ijfoodmicro.2022.109701

Jean-Marc Aury et al.
Long-read and chromosome-scale assembly of the hexaploid wheat genome achieves high resolution for research and breeding
GigaScience 2022, vol. 11
doi: 10.1093/gigascience/giac034

Hong Joo Kim et al.
Heterozygous frameshift variants in HNRNPA2B1 cause early-onset oculopharyngeal muscular dystrophy
Nature Communications 2022, vol. 13, issue 1
doi: 10.1038/s41467-022-30015-1

Stefano Gnan et al.
Kronos scRT: a uniform framework for single-cell replication timing analysis
Nature Communications 2022, vol. 13, issue 1
doi: 10.1038/s41467-022-30043-x

Aurélie A G Gabriel et al.
Genetic Analysis of Lung Cancer and the Germline Impact on Somatic Mutation Burden
JNCI: Journal of the National Cancer Institute 2022, vol. 114, issue 8
doi: 10.1093/jnci/djac087

Aurélie A G Gabriel et al.
Genetic Analysis of Lung Cancer and the Germline Impact on Somatic Mutation Burden
JNCI: Journal of the National Cancer Institute 2022
doi: 10.1093/jnci/djac087

S. Cohen et al.
A POLD3/BLM dependent pathway handles DSBs in transcribed chromatin upon excessive RNA:DNA hybrid accumulation
Nature Communications 2022, vol. 13, issue 1
doi: 10.1038/s41467-022-29629-2

Laura Thirouard et al.
Identification of a Crosstalk among TGR5, GLIS2, and TP53 Signaling Pathways in the Control of Undifferentiated Germ Cell Homeostasis and Chemoresistance
Advanced Science 2022
doi: 10.1002/advs.202200626

Ming Wen et al.
An ancient truncated duplication of the anti‐Müllerian hormone receptor type 2 gene is a potential conserved master sex determinant in the Pangasiidae catfish family
Molecular Ecology Resources 2022
doi: 10.1111/1755-0998.13620

Ming Wen et al.
An ancient truncated duplication of the anti‐Müllerian hormone receptor type 2 gene is a potential conserved master sex determinant in the Pangasiidae catfish family
Molecular Ecology Resources 2022, vol. 22, issue 6
doi: 10.1111/1755-0998.13620