Publications 2021

Chiara Bernardi et al.
CD4+ T cells require Ikaros to inhibit their differentiation toward a pathogenic cell fate
Proceedings of the National Academy of Sciences 2021, vol. 118, issue 17
doi: 10.1073/pnas.2023172118

Daniel Jeffery et al.
CENP-A overexpression promotes distinct fates in human cells, depending on p53 status
Communications Biology 2021, vol. 4, issue 1
doi: 10.1038/s42003-021-01941-5

Elise J. Gay et al.
Large-scale transcriptomics to dissect 2 years of the life of a fungal phytopathogen interacting with its host plant
BMC Biology 2021, vol. 19, issue 1
doi: 10.1186/s12915-021-00989-3

Katarzyna Siudeja et al.
Unraveling the features of somatic transposition in the Drosophila intestine
The EMBO Journal 2021
doi: 10.15252/embj.2020106388

Nicolas Huot et al.
SIV-induced terminally differentiated adaptive NK cells in lymph nodes associated with enhanced MHC-E restricted activity
Nature Communications 2021, vol. 12, issue 1
doi: 10.1038/s41467-021-21402-1

Tracy Rabilloud et al.
Single-cell profiling identifies pre-existing CD19-negative subclones in a B-ALL patient with CD19-negative relapse after CAR-T therapy
Nature Communications 2021, vol. 12, issue 1
doi: 10.1038/s41467-021-21168-6

Lara Zorro Shahidian et al.
Succinylation of H3K122 destabilizes nucleosomes and enhances transcription
EMBO reports 2021, vol. 22, issue 3
doi: 10.15252/embr.202051009

Fabienne Bejjani et al.
Fra-1 regulates its target genes via binding to remote enhancers without exerting major control on chromatin architecture in triple negative breast cancers
Nucleic Acids Research 2021, vol. 49, issue 5
doi: 10.1093/nar/gkab053

François Rousset et al.
The impact of genetic diversity on gene essentiality within the Escherichia coli species
Nature Microbiology 2021, vol. 6, issue 3
doi: 10.1038/s41564-020-00839-y

Charlotte Pandiani et al.
Single-cell RNA sequencing reveals intratumoral heterogeneity in primary uveal melanomas and identifies HES6 as a driver of the metastatic disease
Cell Death & Differentiation 2021
doi: 10.1038/s41418-020-00730-7

Rafael Alcalá-Vida et al.
Age-related and disease locus-specific mechanisms contribute to early remodelling of chromatin structure in Huntington’s disease mice
Nature Communications 2021, vol. 12, issue 1
doi: 10.1038/s41467-020-20605-2

Nancy Dong et al.
Ion channel profiling of the Lymnaea stagnalis ganglia via transcriptome analysis
BMC Genomics 2021, vol. 22, issue 1
doi: 10.1186/s12864-020-07287-2

Xavière Lornage et al.
Selective loss of a LAP1 isoform causes a muscle-specific nuclear envelopathy
neurogenetics 2021, vol. 22, issue 1
doi: 10.1007/s10048-020-00632-3

Mathieu Rousseau-Gueutin et al.
Long-read assembly of the Brassica napus reference genome Darmor-bzh
GigaScience 2020, vol. 9, issue 12
doi: 10.1093/gigascience/giaa137

Aurélie Pirayre et al.
Glucose-lactose mixture feeds in industry-like conditions: a gene regulatory network analysis on the hyperproducing Trichoderma reesei strain Rut-C30
BMC Genomics 2020, vol. 21, issue 1
doi: 10.1186/s12864-020-07281-8

Ping Han et al.
N2O and NOy production by the comammox bacterium Nitrospira inopinata in comparison with canonical ammonia oxidizers
Water Research 2020, vol. 190
doi: 10.1016/j.watres.2020.116728

Florence Vorspan et al.
Translational study of the whole transcriptome in rats and genetic polymorphisms in humans identifies LRP1B and VPS13A as key genes involved in tolerance to cocaine-induced motor disturbances
Translational Psychiatry 2020, vol. 10, issue 1
doi: 10.1038/s41398-020-01050-7

José-Manuel Rodriguez-Vargas et al.
Parp3 promotes astrocytic differentiation through a tight regulation of Nox4-induced ROS and mTorc2 activation
Cell Death & Disease 2020, vol. 11, issue 11
doi: 10.1038/s41419-020-03167-5

Daiki Mori et al.
The T cell CD6 receptor operates a multitask signalosome with opposite functions in T cell activation
Journal of Experimental Medicine 2020, vol. 218, issue 2
doi: 10.1084/jem.20201011

Kelle C. Freel et al.
Effect of arsenite and growth in biofilm conditions on the evolution of Thiomonas sp. CB2
Microbial Genomics 2020, vol. 6, issue 10
doi: 10.1099/mgen.0.000447

Céline Osinski et al.
Type 2 diabetes is associated with impaired jejunal enteroendocrine GLP-1 cell lineage in human obesity
International Journal of Obesity 2020, vol. 45, issue 1
doi: 10.1038/s41366-020-00694-1

Sara Castagnola et al.
Agonist-induced functional analysis and cell sorting associated with single-cell transcriptomics characterizes cell subtypes in normal and pathological brain
Genome Research 2020, vol. 30, issue 11
doi: 10.1101/gr.262717.120

Eva M. Seipelt et al.
Prenatal maternal vitamin D deficiency sex‐dependently programs adipose tissue metabolism and energy homeostasis in offspring
The FASEB Journal 2020, vol. 34, issue 11
doi: 10.1096/fj.201902924rr

Mickael Meyer et al.
Profiling the Non-genetic Origins of Cancer Drug Resistance with a Single-Cell Functional Genomics Approach Using Predictive Cell Dynamics
Cell Systems 2020, vol. 11, issue 4
doi: 10.1016/j.cels.2020.08.019

Aleksandra S. Chikina et al.
Macrophages Maintain Epithelium Integrity by Limiting Fungal Product Absorption
Cell 2020, vol. 183, issue 2
doi: 10.1016/j.cell.2020.08.048

Ngan Thi Phan et al.
Genome structure and content of the rice root‐knot nematode ( Meloidogyne graminicola )
Ecology and Evolution 2020, vol. 10, issue 20
doi: 10.1002/ece3.6680

Alexander Goikoetxea et al.
Genetic pathways underpinning hormonal stress responses in fish exposed to short- and long-term warm ocean temperatures
Ecological Indicators 2020, vol. 120
doi: 10.1016/j.ecolind.2020.106937

Karima Drareni et al.
Adipocyte Reprogramming by the Transcriptional Coregulator GPS2 Impacts Beta Cell Insulin Secretion
Cell Reports 2020, vol. 32, issue 11
doi: 10.1016/j.celrep.2020.108141

Supawich Morkmued et al.
Deficiency of the SMOC2 matricellular protein impairs bone healing and produces age-dependent bone loss
Scientific Reports 2020, vol. 10, issue 1
doi: 10.1038/s41598-020-71749-6

Thomas Baranek et al.
High Dimensional Single-Cell Analysis Reveals iNKT Cell Developmental Trajectories and Effector Fate Decision
Cell Reports 2020, vol. 32, issue 10
doi: 10.1016/j.celrep.2020.108116