Publications 2023

Roseline Vibert et al.
Molecular characterisation of tumours of the lacrimal apparatus
Histopathology 2023
doi: 10.1111/his.15040

Dimitry Y. Sorokin et al.
Trichlorobacter ammonificans, a dedicated acetate-dependent ammonifier with a novel module for dissimilatory nitrate reduction to ammonia
The ISME Journal 2023
doi: 10.1038/s41396-023-01473-2

Marta Lourenço et al.
Phages against Noncapsulated Klebsiella pneumoniae: Broader Host range, Slower Resistance
Microbiology Spectrum 2023
doi: 10.1128/spectrum.04812-22

Benjamin Noel et al.
Pervasive tandem duplications and convergent evolution shape coral genomes
Genome Biology 2023, vol. 24, issue 1
doi: 10.1186/s13059-023-02960-7

Eric J. Armstrong et al.
Host transcriptomic plasticity and photosymbiotic fidelity underpin Pocillopora acclimatization across thermal regimes in the Pacific Ocean
Nature Communications 2023, vol. 14, issue 1
doi: 10.1038/s41467-023-38610-6

Quentin Lamy-Besnier et al.
Chromosome folding and prophage activation reveal specific genomic architecture for intestinal bacteria
Microbiome 2023, vol. 11, issue 1
doi: 10.1186/s40168-023-01541-x

Jean-Francois Gout et al.
Dynamics of Gene Loss following Ancient Whole-Genome Duplication in the Cryptic Paramecium Complex
Molecular Biology and Evolution 2023, vol. 40, issue 5
doi: 10.1093/molbev/msad107

François Lecoquierre et al.
High diagnostic potential of short and long read genome sequencing with transcriptome analysis in exome-negative developmental disorders
Human Genetics 2023, vol. 142, issue 6
doi: 10.1007/s00439-023-02553-1

Lény Calvez et al.
Meiotic Behaviors of Allotetraploid Citrus Drive the Interspecific Recombination Landscape, the Genetic Structures, and Traits Inheritance in Tetrazyg Progenies Aiming to Select New Rootstocks
Plants 2023, vol. 12, issue 8
doi: 10.3390/plants12081630

William Timothy Treal Taylor et al.
Early dispersal of domestic horses into the Great Plains and northern Rockies
Science 2023, vol. 379, issue 6639
doi: 10.1126/science.adc9691

Elise Parey et al.
Genome structures resolve the early diversification of teleost fishes
Science 2023, vol. 379, issue 6632
doi: 10.1126/science.abq4257

Bo-Hyung Lee et al.
Investigation of the Genus Flavobacterium as a Reservoir for Fish-Pathogenic Bacterial Species: the Case of Flavobacterium collinsii
Applied and Environmental Microbiology 2023, vol. 89, issue 4
doi: 10.1128/aem.02162-22

Olaya Rendueles et al.
Competition between lysogenic and sensitive bacteria is determined by the fitness costs of the different emerging phage-resistance strategies
eLife 2023, vol. 12
doi: 10.7554/elife.83479

Linnea F. M. Kop et al.
Complete Genome Sequence of Nitrospina watsonii 347, Isolated from the Black Sea
Microbiology Resource Announcements 2023, vol. 12, issue 4
doi: 10.1128/mra.00078-23

Lise Mangiante et al.
Multiomic analysis of malignant pleural mesothelioma identifies molecular axes and specialized tumor profiles driving intertumor heterogeneity
Nature Genetics 2023
doi: 10.1038/s41588-023-01321-1

Saadat Hussain et al.
Short tandem repeats are important contributors to silencer elements in T cells
Nucleic Acids Research 2023
doi: 10.1093/nar/gkad187

Estelle Colin et al.
Stepwise use of genomics and transcriptomics technologies increases diagnostic yield in Mendelian disorders
Frontiers in Cell and Developmental Biology 2023, vol. 11
doi: 10.3389/fcell.2023.1021920

Karine Cahier et al.
Environmental vibrio phage–bacteria interaction networks reflect the genetic structure of host populations
Environmental Microbiology 2023
doi: 10.1111/1462-2920.16366

Sarah Temmam et al.
SARS‐CoV‐2‐related bat virus behavior in human‐relevant models sheds light on the origin of COVID‐19
EMBO reports 2023
doi: 10.15252/embr.202256055

Hugo Doré et al.
Differential global distribution of marine picocyanobacteria gene clusters reveals distinct niche-related adaptive strategies
The ISME Journal 2023
doi: 10.1038/s41396-023-01386-0

Xuexue Liu et al.
DNA methylation-based profiling of horse archaeological remains for age-at-death and castration
iScience 2023, vol. 26, issue 3
doi: 10.1016/j.isci.2023.106144

Alexis Dereeper et al.
Naegleria genus pangenome reveals new structural and functional insights into the versatility of these free-living amoebae
Frontiers in Microbiology 2023, vol. 13
doi: 10.3389/fmicb.2022.1056418

Alexis Dereeper et al.
Naegleria genus pangenome reveals new structural and functional insights into the versatility of these free-living amoebae
Frontiers in Microbiology 2023, vol. 13
doi: 10.3389/fmicb.2022.1056418

Enora Dupas et al.
Suspicions of two bridgehead invasions of Xylella fastidiosa subsp. multiplex in France
Communications Biology 2023, vol. 6, issue 1
doi: 10.1038/s42003-023-04499-6

Mandy L. Ballinger et al.
Heritable defects in telomere and mitotic function selectively predispose to sarcomas
Science 2023, vol. 379, issue 6629
doi: 10.1126/science.abj4784