Publications 2021

Miriam I. Brandt et al.
Evaluating sediment and water sampling methods for the estimation of deep-sea biodiversity using environmental DNA
Scientific Reports 2021, vol. 11, issue 1
doi: 10.1038/s41598-021-86396-8

Miriam I. Brandt et al.
Bioinformatic pipelines combining denoising and clustering tools allow for more comprehensive prokaryotic and eukaryotic metabarcoding
Molecular Ecology Resources 2021
doi: 10.1111/1755-0998.13398

François Rousset et al.
The impact of genetic diversity on gene essentiality within the Escherichia coli species
Nature Microbiology 2021, vol. 6, issue 3
doi: 10.1038/s41564-020-00839-y

Benjamin Linard et al.
PEWO: a collection of workflows to benchmark phylogenetic placement
Bioinformatics 2020, vol. 36, issue 21
doi: 10.1093/bioinformatics/btaa657

Annabelle Gérard et al.
High-throughput single-cell activity-based screening and sequencing of antibodies using droplet microfluidics
Nature Biotechnology 2020, vol. 38, issue 6
doi: 10.1038/s41587-020-0466-7

Olivier Zemb et al.
Absolute quantitation of microbes using 16S rRNA gene metabarcoding: A rapid normalization of relative abundances by quantitative PCR targeting a 16S rRNA gene spike‐in standard
MicrobiologyOpen 2020, vol. 9, issue 3
doi: 10.1002/mbo3.977

Nicolas Milon et al.
A tunable filter for high molecular weight DNA selection and linked-read sequencing
Lab on a Chip 2019, vol. 20, issue 1
doi: 10.1039/c9lc00965e

M. Serra et al.
Integrated droplet microfluidic device for magnetic particles handling: Application to DNA size selection in NGS libraries preparation
Sensors and Actuators B: Chemical 2019, vol. 305
doi: 10.1016/j.snb.2019.127346