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Best of 2017

CNRGH Machiela MJ. et al. Genetic variants related to longer telomere length are associated with increased risk of Renal Cell Carcinoma. Europ. Urol. (2017) Nov ; 72 (5) : 747-754 doi.org/10.1016/j.eururo.2017.07.015
Institut Pasteur Domman D. et al. Integrated view of Vibrio cholerae in the Americas. Science (2017) Nov ; 358(6364):789-793. doi : 10.1126/science.aao2136
Genoscope Costea PI. et al. Towards standards for human fecal sample processing in metagenomic studies. Nat Biotechnol. (2017) Nov ; 35(11):1069-1076. doi : 10.1038/nbt.3960
MicroScope & Genoscope Ficko-Blean E. et al. Carrageenan catabolism is encoded by a complex regulon in marine heterotrophic bacteria. Nat Commun. (2017) Nov ; 8(1):1685. doi : 10.1038/s41467-017-01832-6
Genoscope Schmidt MHW. et al. De novo assembly of a new Solanum pennellii accession using nanopore sequencing. Plant Cell (2017) Oct ; 29(10):2336-2348. doi : 10.1105/tpc.17.00521
GenOuest Cohen-Boulakia S. et al. Scientific workflows for computational reproducibility in the life sciences : Status, challenges and opportunities. Future Generation Computer Systems (2017) Oct ; 75:284-298. doi:10.1016/j.future.2017.01.012.
CNRGH Sims R. et al. Rare coding variants in PLCG2, ABI3, and TREM2 implicate microglial-mediated innate immunity in Alzheimer’s disease. Nat Genet. (2017) Sep ; 49(9):1373-1384. doi : 10.1038/ng.3916
Institut Curie Boeva V. et al. Heterogeneity of neuroblastoma cell identity defined by transcriptional circuitries. Nature Genetics (2017) Sep ; 49(9):1408-1413. doi : 10.1038/ng.3921.
ENS Bonnet A. et al. Quaking RNA-binding proteins control early myofibril formation by modulating Tropomyosin. Dev Cell. (2017) Sep ; 42(5):527-541.e4. doi : 10.1016/j.devcel.2017.08.004.
MGX Morchikh M. et al. HEXIM1 and NEAT1 long non-coding RNA form a multi-subunit complex that regulates DNA-mediated innate immune response. Mol Cell. (2017) Aug ; 67(3):387-399.e5.doi : 10.1016/j.molcel.2017.06.020.
ENS Perrin S. et al. Aozan : an automated post-sequencing data-processing pipeline. Bioinformatics (2017) Jul ; 33(14):2212-2213. doi : 10.1093/bioinformatics/btx154.
TGML Dao LTM. et al. Genome-wide characterization of mammalian promoters with distal enhancer functions. Nature Genetics. (2017) Jul ; 49(7):1073-1081. doi : 10.1038/ng.3884.
GeT Badouin H. et al. The sunflower genome provides insights into oil metabolism, flowering and Asterid evolution. Nature (2017) Jun ; 546:148–152. doi:10.1038/nature22380.
MGX Kassambara A. et al. Global miRNA expression analysis identifies novel key regulators of plasma cell differentiation and malignant plasma cell. Nucleic Acids Res. (2017) Jun ; 45(10):5639-5652. doi : 10.1093/nar/gkx327
PACA- Bioinfo Fabre E. et al. Noumeavirus replication relies on a transient remote control of the host nucleus. Nat Commun. (2017) Apr ; 8:15087. doi : 10.1038/ncomms15087
TGML Barral S. et al. Histone variant H2A.L.2 guides transition protein-dependent protamine assembly in male germ cells . Molecular Cell (2017) Apr ; 66(1):89-101.e8. doi : 10.1016/j.molcel.2017.02.025.
PRABI Faucon F. et al. In the hunt for genomic markers of metabolic resistance to pyrethroids in the mosquito Aedes aegypti : An integrated next-generation sequencing approach. PLoS Negl. Trop. Dis. (2017) Apr ; 11(4):e0005526. doi : 10.1371/journal.pntd.0005526.
UCAGenomiX Arguel M.J. et al. A cost effective 5΄ selective single cell transcriptome profiling approach with improved UMI design. Nucleic Acids Res. (2017) Apr ; 45(7):e48. doi : 10.1093/nar/gkw1242
Institut Pasteur & CNRGH Mercati O. et al. CNTN6 mutations are risk factors for abnormal auditory sensory perception in autism spectrum disorders. Mol Psychiatry (2017) Apr ; 22(4):625-633. doi : 10.1038/mp.2016.61
UCAGenomiX Zangari J. et al. Rapid decay of engulfed extracellular miRNA by XRN1 exonuclease promotes transient epithelial-mesenchymal transition. Nucleic Acids Res. (2017) Apr ; 45(7):4131-4141. doi : 10.1093/nar/gkw1284
GenomEast Le Gras S. et al. Altered enhancer transcription underlies Huntington’s disease striatal transcriptional signature. Sci Rep. (2017) Feb ; 7:42875. doi : 10.1038/srep42875.
Institut Curie Greenberg MV. et al. Transient transcription in the early embryo sets an epigenetic state that programs postnatal growth. Nat Genet. (2017) Jan ; 49(1):110-118. doi : 10.1038/ng.3718
MicroScope Vallenet D. et al. MicroScope in 2017 : an expanding and evolving integrated resource for community expertise of microbial genomes. Nucleic Acids Res. (2017) Jan ; 45(D1):D517-D528. doi : 10.1093/nar/gkw1101.


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