Publications 2022

Estelle Colin et al.
OMIXCARE: OMICS technologies solved about 33% of the patients with heterogeneous rare neuro-developmental disorders and negative exome sequencing results and identified 13% additional candidate variants
Frontiers in Cell and Developmental Biology 2022, vol. 10
doi: 10.3389/fcell.2022.1021785

Ming Wen et al.
Characterization of the sex determining region of channel catfish (Ictalurus punctatus) and development of a sex-genotyping test
Gene 2022, vol. 850
doi: 10.1016/j.gene.2022.146933

Eugen Pfeifer et al.
Phage-Plasmids Spread Antibiotic Resistance Genes through Infection and Lysogenic Conversion
mBio 2022, vol. 13, issue 5
doi: 10.1128/mbio.01851-22

Nina Guérin et al.
Genomic adaptation of the picoeukaryote Pelagomonas calceolata to iron-poor oceans revealed by a chromosome-scale genome sequence
Communications Biology 2022, vol. 5, issue 1
doi: 10.1038/s42003-022-03939-z

Domitille Jarrige et al.
Complete Genome of Sphingomonas aerolata PDD-32b-11, Isolated from Cloud Water at the Summit of Puy de Dôme, France
Microbiology Resource Announcements 2022
doi: 10.1128/mra.00684-22

Evelyn T. Todd et al.
The genomic history and global expansion of domestic donkeys
Science 2022, vol. 377, issue 6611
doi: 10.1126/science.abo3503

L. Mangiante et al.
OA04.05 MESOMICS Project: Using Whole-Genome Sequencing Data to Fill the Gaps in Malignant Pleural Mesothelioma Molecular Studies
Journal of Thoracic Oncology 2022, vol. 17, issue 9
doi: 10.1016/j.jtho.2022.07.029

Claudia Pogoreutz et al.
High live coral cover and incidence of a pink-spotted coral phenotype on remote reefs off Clipperton Island, Tropical Eastern Pacific
Marine Biology 2022, vol. 169, issue 9
doi: 10.1007/s00227-022-04101-3

Benjamin Penaud et al.
SNP4OrphanSpecies: A bioinformatics pipeline to isolate molecular markers for studying genetic diversity of orphan species
Biodiversity Data Journal 2022, vol. 10
doi: 10.3897/bdj.10.e85587

S. Legood et al.
A Defect in Lipoprotein Modification by Lgt Leads to Abnormal Morphology and Cell Death in Escherichia coli That Is Independent of Major Lipoprotein Lpp
Journal of Bacteriology 2022, vol. 204, issue 9
doi: 10.1128/jb.00164-22

Riccardo Gamba et al.
Enrichment of centromeric DNA from human cells
PLOS Genetics 2022, vol. 18, issue 7
doi: 10.1371/journal.pgen.1010306

Juliette Coursimault et al.
Deep intronic NIPBL de novo mutations and differential diagnoses revealed by whole genome and RNA sequencing in Cornelia de Lange syndrome patients
Human Mutation 2022
doi: 10.1002/humu.24438

Salima Tighidet et al.
Dyes Biodegradation in the Presence of Hexavalent Chromium by Streptomyces sp. KY75: a Novel Heavy Metal Resistant Strain Isolated in Algeria
Water, Air, & Soil Pollution 2022, vol. 233, issue 7
doi: 10.1007/s11270-022-05756-w

Stéphanie Fouteau et al.
Complete Genome Sequence of Tepidibacter sp. Strain 8C15b, Isolated from Bank Sediments of Haiphong Bay, Vietnam
Microbiology Resource Announcements 2022, vol. 11, issue 7
doi: 10.1128/mra.00132-22

et al.
Geographical contrasts of Y‐chromosomal haplogroups from wild and domestic goats reveal ancient migrations and recent introgressions
Molecular Ecology 2022
doi: 10.1111/mec.16579

Pierre Lopez et al.
Genomic characterization of Tenacibaculum maritimum O‐antigen gene cluster and development of a multiplex PCR‐based serotyping scheme
Transboundary and Emerging Diseases 2022
doi: 10.1111/tbed.14637

Laura Molina et al.
Bi-allelic hydroxymethylbilane synthase inactivation defines a homogenous clinico-molecular subtype of hepatocellular carcinoma
Journal of Hepatology 2022, vol. 77, issue 4
doi: 10.1016/j.jhep.2022.05.018

Laia Richart et al.
XIST loss impairs mammary stem cell differentiation and increases tumorigenicity through Mediator hyperactivation
Cell 2022, vol. 185, issue 12
doi: 10.1016/j.cell.2022.04.034

Jan Smyčka et al.
Tempo and drivers of plant diversification in the European mountain system
Nature Communications 2022, vol. 13, issue 1
doi: 10.1038/s41467-022-30394-5

Andrew J. Jasonowicz et al.
Generation of a chromosome‐level genome assembly for Pacific halibut ( Hippoglossus stenolepis ) and characterization of its sex‐determining genomic region
Molecular Ecology Resources 2022
doi: 10.1111/1755-0998.13641

Victoria Mesa et al.
Core-, pan- and accessory genome analyses of Clostridium neonatale: insights into genetic diversity
Microbial Genomics 2022, vol. 8, issue 5
doi: 10.1099/mgen.0.000813

Quentin Piet et al.
A chromosome-level, haplotype-phased Vanilla planifolia genome highlights the challenge of partial endoreplication for accurate whole-genome assembly
Plant Communications 2022, vol. 3, issue 5
doi: 10.1016/j.xplc.2022.100330

Jean-Marc Aury et al.
Long-read and chromosome-scale assembly of the hexaploid wheat genome achieves high resolution for research and breeding
GigaScience 2022, vol. 11
doi: 10.1093/gigascience/giac034

S. Cohen et al.
A POLD3/BLM dependent pathway handles DSBs in transcribed chromatin upon excessive RNA:DNA hybrid accumulation
Nature Communications 2022, vol. 13, issue 1
doi: 10.1038/s41467-022-29629-2

Ming Wen et al.
An ancient truncated duplication of the anti‐Müllerian hormone receptor type 2 gene is a potential conserved master sex determinant in the Pangasiidae catfish family
Molecular Ecology Resources 2022
doi: 10.1111/1755-0998.13620

Ming Wen et al.
An ancient truncated duplication of the anti‐Müllerian hormone receptor type 2 gene is a potential conserved master sex determinant in the Pangasiidae catfish family
Molecular Ecology Resources 2022, vol. 22, issue 6
doi: 10.1111/1755-0998.13620

Juliette Mainguené et al.
Human papilloma virus integration sites and genomic signatures in head and neck squamous cell carcinoma
Molecular Oncology 2022, vol. 16, issue 16
doi: 10.1002/1878-0261.13219

Rachel A. DeWeerd et al.
Prospectively defined patterns of APOBEC3A mutagenesis are prevalent in human cancers
Cell Reports 2022, vol. 38, issue 12
doi: 10.1016/j.celrep.2022.110555

Adrien Tran Lu Y et al.
Subtle limits to connectivity revealed by outlier loci within two divergent metapopulations of the deep‐sea hydrothermal gastropod Ifremeria nautilei
Molecular Ecology 2022, vol. 31, issue 10
doi: 10.1111/mec.16430

Annela Semai et al.
Complete Genome Sequence of Stenotrophomonas maltophilia 1800, a New Bacterial Strain with Potential for Bioremediation of Oil-Contaminated Environments
Microbiology Resource Announcements 2022, vol. 11, issue 2
doi: 10.1128/mra.01116-21