Projet-IRIGIN
Tranchant-Dubreuil Christine et al.
FrangiPANe, a tool for creating a panreference using left behind reads
NAR Genomics and Bioinformatics 2023, vol. 5, issue 1
doi: 10.1093/nargab/lqad013
Philippe Cubry et al.
Genome Wide Association Study Pinpoints Key Agronomic QTLs in African Rice Oryza glaberrima
Rice 2020, vol. 13, issue 1
doi: 10.1186/s12284-020-00424-1
Mathias Lorieux et al.
NOISYmputer: genotype imputation in bi-parental populations for noisy low-coverage next-generation sequencing data
2019
doi: 10.1101/658237
Cubry P et al.
The Rise and Fall of African Rice Cultivation Revealed by Analysis of 246 New Genomes
Current Biology 2018 28(14)
doi: 10.1016/j.cub.2018.05.066
Delphine Mieulet et al.
Unleashing meiotic crossovers in crops
Nature Plants 2018, vol. 4, issue 12
doi: 10.1038/s41477-018-0311-x
Gustave Djedatin et al.
DuplicationDetector , a light weight tool for duplication detection using NGS data
Current Plant Biology 2017, vol. 9-10
doi: 10.1016/j.cpb.2017.07.001
Fragoso CA. et al.
Genetic architecture of a rice nested association mapping population.
G3 (2017) Jun. 7(6):1913-1926.
doi: 10.1534/g3.117.041608
Monat C. et al.
De novo assemblies of three Oryza glaberrima accessions provide first insights about pan-genome of african rices.
Genome Biol Evol. (2017) Jan 1. 9(1):1-6.
doi: 10.1093/gbe/evw253
Cécile Monat et al.
TOGGLE: toolbox for generic NGS analyses
BMC Bioinformatics 2015, vol. 16, issue 1
doi: 10.1186/s12859-015-0795-6